DRSC/TRiP Functional Genomics Resources

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Protein Alignment scro and Barx2

DIOPT Version :10

Sequence 1:NP_001015473.1 Gene:scro / 3355151 FlyBaseID:FBgn0287186 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_038828.2 Gene:Barx2 / 12023 MGIID:109617 Length:283 Species:Mus musculus


Alignment Length:286 Identity:72/286 - (25%)
Similarity:122/286 - (42%) Gaps:67/286 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 HHHHNLSSIHHLQNLHSQHQSTLFNSNHSTPFSVTDILSPIEES---YRKLELNGNPPS------ 140
            |....|||...|:....::::          |.:.:|||  :|:   :.||.|....||      
Mouse     4 HAELRLSSPGQLKAARRRYKT----------FMIDEILS--KETCDYFEKLSLYSVCPSLVVRPK 56

  Fly   141 PFRSNSSSSSINSPGTLTTSTMANPYAMGTLYHSPGVQTYCGPTDNLSLAGHYTDMRNSASWYGS 205
            |..|.:.|.|:.:...|:..|           ..|.|.::..||.:                 |.
Mouse    57 PLHSCTGSPSLRAYPLLSVIT-----------RQPTVISHLVPTGS-----------------GL 93

  Fly   206 TANDPRFAISRLMSSSASGTMSHMGNMSGLAACSVSDSKPLQFPLAQR--RKRRVLFTQAQVYEL 268
            |....|..::...:::|:      ....|..|.:.|:|:..|....|:  |:.|.:||:.|:..|
Mouse    94 TPVLTRHPVAAAEAAAAA------AETPGGEALASSESETEQPTPRQKKPRRSRTIFTELQLMGL 152

  Fly   269 ERRFKQQRYLSAPEREHLASLIHLTPTQVKIWFQNHRYKCKRQAKEKAMAEQNQHNQPASSPRRV 333
            |::|::|:|||.|:|..||..:.||..|||.|:||.|.|.|:...:   ..|....:|...|::.
Mouse   153 EKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKMVLK---GGQEAPTKPKGRPKKN 214

  Fly   334 AVPV---LVKDGKPCSGNNSSSQSQQ 356
            ::|.   :..:.|    .||.:|||:
Mouse   215 SIPTSEEIEAEEK----MNSQAQSQE 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scroNP_001015473.1 Homeodomain 254..310 CDD:459649 26/55 (47%)
Barx2NP_038828.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 107..141 8/39 (21%)
Homeodomain 138..194 CDD:459649 26/55 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 198..283 10/46 (22%)

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