DRSC/TRiP Functional Genomics Resources

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Protein Alignment scro and LOC11175794

DIOPT Version :10

Sequence 1:NP_001015473.1 Gene:scro / 3355151 FlyBaseID:FBgn0287186 Length:468 Species:Drosophila melanogaster
Sequence 2:XP_061507321.1 Gene:LOC11175794 / 11175794 VectorBaseID:AGAMI1_004020 Length:503 Species:Anopheles gambiae


Alignment Length:525 Identity:109/525 - (20%)
Similarity:177/525 - (33%) Gaps:157/525 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 YTTRIERKSYRELQINRDQ----YFVTAPNEEDLVMSLSPKDTLIHTAISQHHQVDTSTKLNTNE 68
            |.:......|...|...:|    |:..|....|..||:.....|.::..:|..|.:..     |.
Mosquito    11 YQSSYYNSCYNYSQRGPEQFIPNYYQKALQYGDSNMSIPQSQLLQNSQYAQQSQQEIQ-----NI 70

  Fly    69 TSTQNTVSTAAAAAVAHHHHNLSSIHHLQNLHSQHQ-----STLFNSNHSTPFSVTD-------- 120
            :|..::....:|.|..:|....||    .:||::|.     ...|:|.:..|:..|.        
Mosquito    71 SSISSSAYGYSATAQYNHDEQFSS----NSLHTRHHQLENYGNQFDSYYGYPYQTTAHYSLCGAQ 131

  Fly   121 ------ILSPIEESYRKLELNG--------NPPSPFR----SNSSSSSINSPGTLTTSTMANP-- 165
                  :..|.|.....:|...        .||:..|    ..::.:..:||.  ..:.:.||  
Mosquito   132 EHLEEYLYKPTEVERSNVEKRSCEKSCETIKPPAMKRKISEKETNDNEKDSPA--LRALLTNPAK 194

  Fly   166 -------------------------YAMGTLYHSPGVQTYCGPTDNLSLAGHYTD------MRNS 199
                                     |..|.|  ||.......| |.:.|:.:.||      :.||
Mosquito   195 KLKYNPHYAHSMTNESSRRIEATFGYNNGFL--SPAASDRIVP-DIVPLSPNKTDDSIDSLLDNS 256

  Fly   200 ASWYGSTANDPRFAISRLMSSSASGTMSHMG---------NM-SGLAACSVSDSKPLQ------F 248
            :.....|.....:.::.|...:|  |..:.|         || |.:::..|..:...|      .
Mosquito   257 SKQDIVTMQCVDYTLNSLRQITA--TPKYDGVSTPPLSPKNMESAISSQGVESNSWTQNSDHEDH 319

  Fly   249 PLAQRRKRRVLFTQAQVYELERRFKQQRYLSAPEREHLASLIHLTPTQVKIWFQNHRYKCKR--- 310
            |....::.|..:::.|..|||:.|...|||:...|..:||::.||..|:||||||.|.|.|:   
Mosquito   320 PKESSKRTRQSYSRHQTIELEKEFHFNRYLNRRRRIEIASMLKLTERQIKIWFQNRRMKAKKDNS 384

  Fly   311 ----------------QAKEKAMAEQNQHNQPASSPRRVAVPVLVKDGKPCSGNNSSSQ-SQQHG 358
                            |:.|..:|.|:||:             ...|.:|.|.|.|:|. :||.|
Mosquito   385 ASANTPDLTYDGEIPQQSLESIVAVQSQHH-------------TASDSQPLSMNTSASTVTQQVG 436

  Fly   359 TNSTSAGNNTGS--------------ANNGNANSGIVSVTANVSGGLNLITGDAPNSHSPDTSSS 409
            .:......:..|              .|..|.:.........:|.||.       |.|.|..:  
Mosquito   437 RHCDQQMMDGWSYPHSHYSHNQYYYMQNYSNYSQHNFQTAGPISSGLY-------NGHHPHQT-- 492

  Fly   410 LLASY 414
             :|:|
Mosquito   493 -IATY 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scroNP_001015473.1 Homeodomain 254..310 CDD:459649 23/55 (42%)
LOC11175794XP_061507321.1 None

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