DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment scro and LOC11175693

DIOPT Version :10

Sequence 1:NP_001015473.1 Gene:scro / 3355151 FlyBaseID:FBgn0287186 Length:468 Species:Drosophila melanogaster
Sequence 2:XP_061504020.1 Gene:LOC11175693 / 11175693 VectorBaseID:AGAMI1_013927 Length:667 Species:Anopheles gambiae


Alignment Length:286 Identity:68/286 - (23%)
Similarity:102/286 - (35%) Gaps:71/286 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 HHHHNLSSIHHLQNLHSQHQSTLFNSNHSTPFSVTDILSPIEESYRKLELNGNPPSPFRSNSSSS 149
            ||||  ...||.|:.|..|.     .:|.        :||        ...|||....:......
Mosquito   420 HHHH--PHQHHHQHHHPHHA-----LHHQ--------VSP--------HFAGNPFHHHQGQQQQQ 461

  Fly   150 SINSPGTLTTSTMANPYAMGTLYHSPGVQTYCGPTDNLSLAGHYTDMRNSASWYGSTANDPRFA- 213
            ..............:........|:...|.......:::|..|:         :|...|..:|. 
Mosquito   462 QQQQQSQQQMQQQPSQQHQHLPQHAVAHQQQLAAGHHMALGPHH---------HGQNHNREKFKD 517

  Fly   214 ISR--LMSSSASGTMSHMGNMSGLAACSVSDSKPLQFPLAQRRKRRVLFTQAQVYELERRFKQQR 276
            :|:  .|||||:...|                          ::.|.:||..|:..||..|::|:
Mosquito   518 LSKKSAMSSSAASLKS--------------------------KRVRTIFTPEQLERLEAEFERQQ 556

  Fly   277 YLSAPEREHLASLIHLTPTQVKIWFQNHRYKCKRQAKEKAMAEQNQHNQPASSPRRVA--VPVLV 339
            |:..|||.:||..:.||..|||:||||.|.|.:     |...|..|........|::|  ||:..
Mosquito   557 YMVGPERLYLAHTLQLTEAQVKVWFQNRRIKWR-----KHHLEITQQRLALIRQRQIANGVPIPA 616

  Fly   340 KDGKPCSGNNSSSQSQQHGTNSTSAG 365
            .:.:|   ::...|.||...|..|.|
Mosquito   617 GEVQP---HHIQQQQQQQQQNGMSGG 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scroNP_001015473.1 Homeodomain 254..310 CDD:459649 25/55 (45%)
LOC11175693XP_061504020.1 None

Return to query results.
Submit another query.