Protein Alignment scro and nkx3-2

DIOPT Version :10

• Sequence 1: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Sequence 2: XP_002940787.1
• Gene: nkx3-2 / 100497965
• XenbaseID: XB-GENE-876834
• Length: 329
• Species: Xenopus tropicalis
• Alignment Length: 269
• Identity: 81/269 - (30%)
• Similarity: 106/269 - (39%)
• Gaps: 81/269 - (30%)

  Fly   109 NSNHSTPFSVTDILSPIEESYRKLELNGNPPSPFRSNSSSSSINSPGTLTTSTMANPYAMGTLYH 173
            :|...||||:..||:..||..|.....|:..||                     |..:.:.....
 Frog    61 SSGSLTPFSIQAILNRKEERARTFPRLGSAVSP---------------------ACCWRIFGETE 104

  Fly   174 SPGVQTYCGPTDNLSLAGHYTDMRNSASWYGSTANDPRFAISRLMSSSASGTMSHMGNMS----- 233
            :.|:.:.||.|......|      ..|.|...:|            .|..|.:...|:..
 Frog   105 ADGLGSLCGGTPGTGAGG------EPAGWDSDSA------------LSEEGELGRPGDTGERKKQ 151

  Fly   234 ----------------GLAACSVSDSKP--------------LQFPLAQRRKR-RVLFTQAQVYE 267
                            |.:.|.:....|              :..|..||:|| |..|:.|||:|
 Frog   152 RPLEARTKGEDEEETPGCSDCEIGAGVPDPSPPDEDPKCEQLMLEPPKQRKKRSRAAFSHAQVFE 216

  Fly   268 LERRFKQQRYLSAPEREHLASLIHLTPTQVKIWFQNHRYKCKRQAKEKAMAEQNQHNQPASSPRR 332
            |||||..|||||.|||..||:.:.||.|||||||||.|||.||    :.||.......||:  ::
 Frog   217 LERRFNHQRYLSGPERADLAASLKLTETQVKIWFQNRRYKTKR----RQMAADLLAAAPAA--KK 275

  Fly   333 VAVPVLVKD 341
            |||.|||:|
 Frog   276 VAVKVLVRD 284

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scro	NP_001015473.1	Homeodomain	254..310	CDD:459649	37/56 (66%)
nkx3-2	XP_002940787.1	Homeodomain	203..259	CDD:459649	37/55 (67%)