Protein Alignment scro and barhl2

DIOPT Version :10

• Sequence 1: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Sequence 2: XP_012817899.1
• Gene: barhl2 / 100493839
• XenbaseID: XB-GENE-482777
• Length: 359
• Species: Xenopus tropicalis
• Alignment Length: 298
• Identity: 71/298 - (23%)
• Similarity: 99/298 - (33%)
• Gaps: 94/298 - (31%)

  Fly    31 APNEEDLVMSLSPKDTLIHT--AISQHHQVDTSTKLNTNETSTQNTVSTAAAAAVAHHHHNLSSI 93
            :|:.|...:..||...:..|  .:.||..||:                       .||     |.
 Frog    42 SPDSEIDTVGSSPSSPISVTMEPVDQHRLVDS-----------------------VHH-----SA 78

  Fly    94 HHLQNLH-------SQHQSTLFNS---NHSTPFSVTDILSPIEESYRKLELNGNPPSPFRS---- 144
            .|||:||       .|.|.....|   ..::.|.:.|||...:........:...|||..:
 Frog    79 QHLQHLHPTQQQSPQQQQPPQLGSAPRTSTSSFLIKDILGDSKPLAACAPYSTTVPSPHHTPKHE 143

  Fly   145 -NSSSSSINSPGTLTTSTMANPYAMGTLYHSPGVQTYCGPTDNLSLAGHYTDMRNSASWYGSTAN 208
             |.||.|.            .|.....:....|.........:..:.||.|..........|..:
 Frog   144 GNGSSESF------------RPKLEQEMQDGKGKAEKIREDLHTDIKGHGTKEEGDREITSSRES 196

  Fly   209 DPRFAISRLMSSSASGTMSHMGNMSGLAACSVSDSKPLQFPLAQRRKRRVLFTQAQVYELERRFK 273
            .|                             |...||        ||.|..|:..|:.:|||.|:
 Frog   197 PP-----------------------------VRAKKP--------RKARTAFSDHQLNQLERSFE 224

  Fly   274 QQRYLSAPEREHLASLIHLTPTQVKIWFQNHRYKCKRQ 311
            :|:|||..:|..||:.::||.||||.|:||.|.|.|||
 Frog   225 RQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKWKRQ 262

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scro	NP_001015473.1	Homeodomain	254..310	CDD:459649	27/55 (49%)
barhl2	XP_012817899.1	Homeodomain	205..261	CDD:459649	27/55 (49%)