Protein Alignment scro and barx1

DIOPT Version :10

• Sequence 1: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Sequence 2: XP_004914882.1
• Gene: barx1 / 100491751
• XenbaseID: XB-GENE-919916
• Length: 253
• Species: Xenopus tropicalis
• Alignment Length: 263
• Identity: 62/263 - (23%)
• Similarity: 97/263 - (36%)
• Gaps: 63/263 - (23%)

  Fly    81 AAVAHHHHNLSSIHHLQNLHSQHQSTLFNSNHSTP------FSVTDILSPIEESYRKLELNGNPP 139
            |.|.|..|...|. .::.:.:.||    :...|.|      |.|..:||..........|.....
 Frog    16 AFVDHRSHRYRSF-MIEEILTDHQ----DPKASPPAGELLKFGVQALLSARPYHNHLALLKAEQA 75

  Fly   140 SPFRSNSSSSSINSPGTLTTSTMANPYAMGTLYHSPGVQTYCGPTDNLSLAGHYTDMRNSASWYG 204
            |.|:...|        .|:...:.:|.:...|....|:|...|...:|.|..|......|:
 Frog    76 SVFKFPLS--------PLSCPALGSPISSALLAAGSGLQGGPGTPHHLPLELHLRGKLESS---- 128

  Fly   205 STANDPRFAISRLMSSSASGTMSHMGNMSGLAACSVSDSKPLQFPLAQRRKRRVLFTQAQVYELE 269
                          .|...|:.:..|                       |:.|.:||:.|:..||
 Frog   129 --------------VSEQGGSKAKKG-----------------------RRSRTVFTELQLMGLE 156

  Fly   270 RRFKQQRYLSAPEREHLASLIHLTPTQVKIWFQNHRYKCKR-QAKEKAMAEQNQHNQPASSPRRV 333
            :||::|:|||.|:|..||..:.|:..|||.|:||.|.|.|: |..:....|  ...:|...|::.
 Frog   157 KRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKKIQVLQGGGLE--SPTKPKGRPKKN 219

  Fly   334 AVP 336
            ::|
 Frog   220 SIP 222

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scro	NP_001015473.1	Homeodomain	254..310	CDD:459649	26/55 (47%)
barx1	XP_004914882.1	Homeodomain	141..197	CDD:459649	26/55 (47%)