Protein Alignment scro and barhl1

DIOPT Version :10

• Sequence 1: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Sequence 2: XP_004916717.1
• Gene: barhl1 / 100491447
• XenbaseID: XB-GENE-853661
• Length: 327
• Species: Xenopus tropicalis
• Alignment Length: 229
• Identity: 70/229 - (30%)
• Similarity: 98/229 - (42%)
• Gaps: 67/229 - (29%)

  Fly   127 ESYRKLELN---------GNPPSPFRS-----------NSSSSSINSPG----------TLTTST 161
            ||...|||:         .:||||.|.           ..:..|...||          |:|:|.
 Frog    31 ESRSPLELSPSSEVSSVCSSPPSPDRDCLDGVAGRQGVALAMESHLQPGVQLSAPSQSRTVTSSF 95

  Fly   162 M-------ANPYAMGTLYHSPGVQTYCGPTDNLS--LAGHYTDMRNSASWYGSTANDPRFAISRL 217
            :       ..|.|....|.|.|     .||.:|:  ||             ...|:|.|..:.:.
 Frog    96 LIRDILADCKPLATCAPYSSNG-----QPTHDLAHCLA-------------SKAADDFRDKLDKS 142

  Fly   218 MSSSAS-----GTMSHMGNMSGLAACSVSDSKPLQFPLAQRRKRRVLFTQAQVYELERRFKQQRY 277
            .||::|     |.:...|:..   ..|..||.|::  |.:.||.|..||..|:.:|||.|::|:|
 Frog   143 SSSTSSESEYKGKVKEEGDRE---ISSSRDSPPVR--LKKPRKARTAFTDHQLAQLERSFERQKY 202

  Fly   278 LSAPEREHLASLIHLTPTQVKIWFQNHRYKCKRQ 311
            ||..:|..||:.::||.||||.|:||.|.|.|||
 Frog   203 LSVQDRMELAASLNLTDTQVKTWYQNRRTKWKRQ 236

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scro	NP_001015473.1	Homeodomain	254..310	CDD:459649	28/55 (51%)
barhl1	XP_004916717.1	Homeodomain	179..235	CDD:459649	28/55 (51%)