Protein Alignment scro and hmx2

DIOPT Version :10

• Sequence 1: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Sequence 2: XP_002937849.1
• Gene: hmx2 / 100486800
• XenbaseID: XB-GENE-480085
• Length: 252
• Species: Xenopus tropicalis
• Alignment Length: 227
• Identity: 63/227 - (27%)
• Similarity: 97/227 - (42%)
• Gaps: 43/227 - (18%)

  Fly   144 SNSSSSSINSPGTLTTSTMANPYAMGT----------LYHSPGVQTYCGPTDNLSLAGHYTDMRN 198
            |.....:.::|.||::.|:.: ...||          :|....:.  |..|.:       .:...
 Frog     2 STKEEPTKSAPATLSSFTIQS-ILQGTTSDRGRTAARVYTREAIS--CPSTSS-------DEDEQ 56

  Fly   199 SASWYGSTAN--DPRFAISRLMSSSASGTMSHMGNMSGLAACSVSD---SKPLQFPLA------- 251
            ..||.|...|  ||....|:..:....|. ....|.:.:.:.|..|   .|...:|.:
 Frog    57 DESWRGHGCNCPDPGDKDSKGQAPHPCGA-HRCPNRTQMPSPSQQDYTEEKDSHYPQSLGDRHKD 120

  Fly   252 -------QRRKRRVLFTQAQVYELERRFKQQRYLSAPEREHLASLIHLTPTQVKIWFQNHRYKCK 309
                   .::|.|.:|:::|||:||..|..:||||:.||..|||.:.||.||||.||||.|.|.|
 Frog   121 GGDKMGNSKKKTRTVFSRSQVYQLESTFDMKRYLSSSERACLASSLQLTETQVKTWFQNRRNKWK 185

  Fly   310 RQAKEKAMAEQNQHNQPASSPRRVAVPVLVKD 341
            ||...:..|....|   ||:...|.:|::.:|
 Frog   186 RQLSAELEAANMAH---ASAQTLVGMPLVFRD 214

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scro	NP_001015473.1	Homeodomain	254..310	CDD:459649	30/55 (55%)
hmx2	XP_002937849.1	Homeodomain	130..186	CDD:459649	30/55 (55%)