Protein Alignment scro and hoxd8

DIOPT Version :10

• Sequence 1: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Sequence 2: NP_001135589.1
• Gene: hoxd8 / 100216142
• XenbaseID: XB-GENE-920113
• Length: 231
• Species: Xenopus tropicalis
• Alignment Length: 262
• Identity: 61/262 - (23%)
• Similarity: 94/262 - (35%)
• Gaps: 95/262 - (36%)

  Fly   135 NGNPPSPFRSNSSSSS---INSPGTLTTSTMANPYAMGTLYHSPGVQ-TYCGPT---DNLSLAGH 192
            :|..|..:..:.|.:.   .:.||||.               |||.| ..||.|   |...|.|:
 Frog    32 SGRAPLVYSGSGSGAPQDYYHHPGTLP---------------SPGYQPAPCGITCHGDPAKLYGY 81

  Fly   193 -------------------YTDMRNSASWYGSTANDPRFAISRLMSSSASGTMSHMGNMSGLAAC 238
                               |.|.::.::..|:   ||    ..|..:|.:   |||
 Frog    82 DHFQRQHIFTTHQEAEPVQYPDCKSPSASIGA---DP----EHLHQNSPA---SHM--------- 127

  Fly   239 SVSDSKPLQFPLAQ------RRKRRVLFTQAQVYELERRFKQQRYLSAPEREHLASLIHLTPTQV 297
                     ||..:      ||:.|..:::.|..|||:.|....||:...|..::..:.||..||
 Frog   128 ---------FPWMRAQVAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQV 183

  Fly   298 KIWFQNHRYKCKRQ-AKEKAMAEQNQHNQPASSPRRVAVPVLVKDGKPCSGNNSSSQSQQHGTNS 361
            ||||||.|.|.|:: :|:|                   .||..::||..:........:|.|...
 Frog   184 KIWFQNRRMKWKKENSKDK-------------------FPVSSQEGKEEADKKGGLHQEQQGREG 229

  Fly   362 TS 363
            ::
 Frog   230 SN 231

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scro	NP_001015473.1	Homeodomain	254..310	CDD:459649	22/55 (40%)
hoxd8	NP_001135589.1	Homeodomain	140..196	CDD:459649	22/55 (40%)