Protein Alignment scro and not

DIOPT Version :10

• Sequence 1: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Sequence 2: NP_001164669.1
• Gene: not / 100038059
• XenbaseID: XB-GENE-478518
• Length: 236
• Species: Xenopus tropicalis
• Alignment Length: 335
• Identity: 66/335 - (19%)
• Similarity: 121/335 - (36%)
• Gaps: 77/335 - (22%)

  Fly   139 ERLSSIDEFGKPDACTYNIL--IH-GCSQSGCFDDALKLFDEMVKKKVKPT---GVTFGTLIHGL 197
            :||:::..:..||..|..::  :| |.:.|........|.:.:      ||   |...|..:..|
 Frog  1625 KRLNTLQHYKVPDGATVGLVPQLHRGSTISQSLAQRCPLGENI------PTLEDGEEGGVCLWHL 1683

  Fly   198 CKDSRVKEALKMKHDMLK---VYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAA 259
            .|.:...|..|::...|:   ....:....||  |.:.|...|.|.   |..|:.::..:.|:..
 Frog  1684 VKATEEPEGAKVRCSSLREREPARAKAIPEIY--LTRLLSMKGTLQ---KFVDDTFQAILSVNRP 1743

  Fly   260 IYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTY-----NVLINGFCVENDSESANRVLDEM 319
            | ...:..|..         :|:|::||....|..|.     |.|:..|.| |..::...:.|..
 Frog  1744 I-PIAVKYLFD---------LLDELAEKHGIEDPGTLHIWKTNSLLLRFWV-NALKNPQLIFDVR 1797

  Fly   320 VEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAV 384
            |...:       :.||.|..:       |::      ..|:  |..:::..|.....|.:.....
 Frog  1798 VSDNV-------DAILAVIAQ-------TFI------DSCT--TSEHKVGRDSPVNKLLYAREIP 1840

  Fly   385 ILDEMLFKGYKPRRDRLEGFLQK----LCE-SGK-------LEILSKVISSLHRGIAGDADVWSV 437
            ...:|:.:.|...|.......|:    |.| ||.       ||.|.::.:.:||       .:..
 Frog  1841 RYKQMVERYYADIRQSSPASYQEMNSALAELSGNYTSAPHCLEALQELYNHIHR-------YYDQ 1898

  Fly   438 MIPTMCKEPV 447
            :|..:.::||
 Frog  1899 IISALEEDPV 1908

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scro	NP_001015473.1	Homeodomain	254..310	CDD:459649	14/60 (23%)
not	NP_001164669.1	Homeodomain	139..195	CDD:459649