DRSC/TRiP Functional Genomics Resources

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Protein Alignment AGO3 and PIWIL1

DIOPT Version :10

Sequence 1:NP_001036627.2 Gene:AGO3 / 3355150 FlyBaseID:FBgn0250816 Length:867 Species:Drosophila melanogaster
Sequence 2:NP_004755.2 Gene:PIWIL1 / 9271 HGNCID:9007 Length:861 Species:Homo sapiens


Alignment Length:883 Identity:332/883 - (37%)
Similarity:501/883 - (56%) Gaps:87/883 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 GRGNLLSLFNKNAGNMGKSISSKDHEIDSGLDFNNSESSGERLLSSHNIETDLITTLQHVNISVG 67
            |||       :..|..|.:..|:..:|.:|....:....|.|....|::..:....|.||     
Human    48 GRG-------RQRGTAGGTAKSQGLQISAGFQELSLAERGGRRRDFHDLGVNTRQNLDHV----- 100

  Fly    68 RGRARLIDTLKTDDHTSNQFITSESKENITKKTKGPESEAIASENGLFFPDLIYGSKGSSVNIYC 132
                                     ||:.|                        ||.|..|.:..
Human   101 -------------------------KESKT------------------------GSSGIIVRLST 116

  Fly   133 NYLKLTTDESKGVFNYEVRFFPPIDSVHLRIKYLNDHKDKLGGTKTFDGNTLYLPILLPNKMTVF 197
            |:.:||:.....::.|.:.:.|.:::..||...|..|:|.:|....|||..|:||..|..|:|..
Human   117 NHFRLTSRPQWALYQYHIDYNPLMEARRLRSALLFQHEDLIGKCHAFDGTILFLPKRLQQKVTEV 181

  Fly   198 ISK---AEDVELQIRILYKKKEEMRNCTQLYNILFDRVMKVLNYVKFDRKQFDPSRPKIIPLAKL 259
            .||   .|||.:.|.:..:.......|.|.|||:|.|::|::|..:..|..::|:.|..||..:|
Human   182 FSKTRNGEDVRITITLTNELPPTSPTCLQFYNIIFRRLLKIMNLQQIGRNYYNPNDPIDIPSHRL 246

  Fly   260 EVWPGYVTAVDEYKGGLMLCCDVSHRILCQKTVLEMLVDLYQQNVEH-YQESARKMLVGNIVLTR 323
            .:|||:.|::.:|:..:|||.||||::|..:|||:.:.:.|.|..|| :||...|.|:|.:|||:
Human   247 VIWPGFTTSILQYENSIMLCTDVSHKVLRSETVLDFMFNFYHQTEEHKFQEQVSKELIGLVVLTK 311

  Fly   324 YNNRTYKINDICFDQNPTCQFEIKTGC-TSYVEYYKQYHNINIKDVNQPLIYSIKKSRGIPAERE 387
            |||:||:::||.:||||...|:...|. .|::|||::.:|..|.|:.||::.|..|.|..|....
Human   312 YNNKTYRVDDIDWDQNPKSTFKKADGSEVSFLEYYRKQYNQEITDLKQPVLVSQPKRRRGPGGTL 376

  Fly   388 NLQFCLIPELCYLTGLRDEVRSDNKLMREIATFTRVSPNQRQMALNKFYENVSNTPAAQEILNSW 452
            .....|||||||||||.|::|:|..:|:::|..||::|.|||..:.:..:.:......|..|..|
Human   377 PGPAMLIPELCYLTGLTDKMRNDFNVMKDLAVHTRLTPEQRQREVGRLIDYIHKNDNVQRELRDW 441

  Fly   453 GLSLTNNSNKISGRQMDIEQIYFSKISVSAGRS-------AEFSKHAVTNEMLKVVHLSKWIIIH 510
            |||..:|....|||.:..|:|:      ..|::       |::||......::.|..|..|::|:
Human   442 GLSFDSNLLSFSGRILQTEKIH------QGGKTFDYNPQFADWSKETRGAPLISVKPLDNWLLIY 500

  Fly   511 LRNYRQAATSLLDNMKQACESLGMNISNPTMISLDHDRIDAYIQALRRNITMNTQMVVCICHNRR 575
            .|...:||.||:.|:.:...::||.:....||.:| ||.:||::.|::.:|.:||:|||:..:.|
Human   501 TRRNYEAANSLIQNLFKVTPAMGMQMRKAIMIEVD-DRTEAYLRVLQQKVTADTQIVVCLLSSNR 564

  Fly   576 DDRYAAIKKICCSEIPIPSQVINAKTLQNDLKIRSVVQKIVLQMNCKLGGSLWTVKIPFKNVMIC 640
            .|:|.||||..|::.|.|||.:.|:||.....:.::..||.||||||:||.||.|.||.|.|||.
Human   565 KDKYDAIKKYLCTDCPTPSQCVVARTLGKQQTVMAIATKIALQMNCKMGGELWRVDIPLKLVMIV 629

  Fly   641 GIDSYHDPSNRGNSVAAFVASINSSYSQWYSKAVVQTKREEIVNGLSASFEIALKMYRKRNGKLP 705
            |||.|||.:....|:|.||||||...::|:|:.:.|.:.:|:|:||....:.||:.:...|..:|
Human   630 GIDCYHDMTAGRRSIAGFVASINEGMTRWFSRCIFQDRGQELVDGLKVCLQAALRAWNSCNEYMP 694

  Fly   706 TNIIIYRDGIGDGQLYTCLNYEIPQFEMVC------GNRIKISYIVVQKRINTRIFSGSGIHLEN 764
            :.||:||||:|||||.|.:|||:||| :.|      |...:::.|||:||:|||.|:.||..|:|
Human   695 SRIIVYRDGVGDGQLKTLVNYEVPQF-LDCLKSIGRGYNPRLTVIVVKKRVNTRFFAQSGGRLQN 758

  Fly   765 PLPGTVVDQHITKSNMYDFFLVSQLVRQGTVTPTHYVVLRDDCNYGPDIIQKLSYKLCFLYYNWA 829
            ||||||:|..:|:...||||:|||.||.|:|:||||.|:.|:....||.||:|:||||.:||||.
Human   759 PLPGTVIDVEVTRPEWYDFFIVSQAVRSGSVSPTHYNVIYDNSGLKPDHIQRLTYKLCHIYYNWP 823

  Fly   830 GTVRIPACCMYAHKLAYLIGQSIQRDVAEALSEKLFYL 867
            |.:|:||.|.||||||:|:||||.|:...:||.:|:||
Human   824 GVIRVPAPCQYAHKLAFLVGQSIHREPNLSLSNRLYYL 861

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AGO3NP_001036627.2 PAZ 291..425 CDD:198017 59/135 (44%)
Piwi_piwi-like_Euk 412..850 CDD:240016 192/450 (43%)
PIWIL1NP_004755.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..64 6/22 (27%)
GAGE 16..106 CDD:461753 17/118 (14%)
D-box. /evidence=ECO:0000269|PubMed:28552346 217..224 2/6 (33%)
PAZ 277..415 CDD:198017 59/137 (43%)
Required for binding 2'-O-methylated 3'-end of piRNAs. /evidence=ECO:0000269|PubMed:21193640 316..318 1/1 (100%)
Piwi_piwi-like_Euk 401..844 CDD:240016 192/450 (43%)
MID region. /evidence=ECO:0000250|UniProtKB:Q9JMB7 479..615 52/136 (38%)

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