DRSC/TRiP Functional Genomics Resources

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Protein Alignment AGO3 and AGO7

DIOPT Version :10

Sequence 1:NP_001036627.2 Gene:AGO3 / 3355150 FlyBaseID:FBgn0250816 Length:867 Species:Drosophila melanogaster
Sequence 2:NP_177103.1 Gene:AGO7 / 843276 AraportID:AT1G69440 Length:990 Species:Arabidopsis thaliana


Alignment Length:894 Identity:214/894 - (23%)
Similarity:362/894 - (40%) Gaps:182/894 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 HTSNQFITS-------ESKENITKKTK-----GPESEAIASENGLFF----PDLIYGSKGSSVNI 130
            |:..:|..|       |.|:...:|.|     ...|.:||.|.....    || ..|..||.:.:
plant   103 HSMTRFHKSLPVSQVVERKQQHQQKKKIQVSNNKVSGSIAIEEAALVVAKRPD-FGGQDGSVIYL 166

  Fly   131 YCNYLKLTTDESKGVFNYEVRFFP-PIDSVHLRIKYL---NDHKDKLGGTKTFDG-NTLYLPILL 190
            ..|:..:..|.|:.:::|.|...| |...:...||..   .|.....|....||| ..:|.|:..
plant   167 LANHFLVKFDSSQRIYHYNVEISPQPSKEIARMIKQKLVETDRNSFSGVVPAFDGRQNIYSPVEF 231

  Fly   191 PNKMTVFISKAEDVELQIRILY---KKKEEMRNCTQLYNILFDRVMKVLNYVKFDRKQ------- 245
            ......|.........:..:.|   ::|:..:...:|:.:    .||:::  |||.|:       
plant   232 QGDRLEFFVNLPIPSCKAVMNYGDLREKQPQKKIEKLFRV----NMKLVS--KFDGKEQRKEGED 290

  Fly   246 FDPSRPKII----------PLAKL----------------EV------WPGYVTAVDEYKGGLML 278
            :.|..|:.|          |:.|.                |:      ..|:..::...:.||.|
plant   291 WAPLPPEYIHALDVILRENPMEKCTSIGRSFYSSSMGGSKEIGGGAVGLRGFFQSLRHTQQGLAL 355

  Fly   279 CCDVS----HRIL-----CQKTVLEMLVDL-----------YQQNVEHYQESARKMLVGNIVLTR 323
            ..|:|    |..:     .||. ||.|.||           .::.||...::.|..:.....:.|
plant   356 NMDLSITAFHESIGVIAYLQKR-LEFLTDLPRNKGRELSLEEKREVEKALKNIRVFVCHRETVQR 419

  Fly   324 YNNRTYKINDICFDQNPTCQFEIKTGCTSY---VEYYKQYHNINIKDVNQPLIYSIKKSRGIPAE 385
            |  |.|.:.:   :......|..:.|  .|   :.|:|.::...|:..|.|   .::.||..|  
plant   420 Y--RVYGLTE---EITENIWFPDREG--KYLRLMSYFKDHYGYEIQFKNLP---CLQISRARP-- 472

  Fly   386 RENLQFCLIP-ELC-------YLTGLRDEVRSDNKLMREIATFTRVSPNQRQMALNKFYENVSNT 442
                  |.:| |||       :|..|.|:..:  |:|:    .....||:|:..::|.... |..
plant   473 ------CYLPMELCMICEGQKFLGKLSDDQAA--KIMK----MGCQKPNERKAIIDKVMTG-SVG 524

  Fly   443 PAAQEILNSWGLSLTNNSNKISGRQMDIEQIYFSKISVSAGRSAEFSKHAVTNEMLKVVHLSKWI 507
            |::......:.|.::.....:.||.:..     .|:.:...|:.:.||      :.|...:.:|.
plant   525 PSSGNQTREFNLEVSREMTLLKGRILQP-----PKLKLDRPRNLKESK------VFKGTRIERWA 578

  Fly   508 IIHL---RNYRQAATSLLDNMKQACESLGMNISNPTM-------------ISLDHDRIDAYIQAL 556
            ::.:   .:.:......::.:.|.||.||:.:|..|:             |||    :::.::.:
plant   579 LMSIGGSSDQKSTIPKFINELTQKCEHLGVFLSKNTLSSTFFEPSHILNNISL----LESKLKEI 639

  Fly   557 RRNITMNTQMVVCICHNRRDDRYAAIKKICCSEIPIPSQVINAKTLQNDLKIRS-VVQKIVLQMN 620
            :|..:.|.|:::|:. .::...|..:|:|..:.|.:.:|..   ...|..|:.| .|..:.|::|
plant   640 QRAASNNLQLIICVM-EKKHKGYGDLKRISETRIGVVTQCC---LYPNITKLSSQFVSNLALKIN 700

  Fly   621 CKLGGSLWTV--KIPF---------KNVMICGIDSYHDP--SNRGNSVAAFVASIN-SSYSQWYS 671
            .|:|||:..:  .||.         :.|:..|.|..|..  .:...||||.|.||| ...:::.|
plant   701 AKIGGSMTELYNSIPSHIPRLLRPDEPVIFMGADVTHPHPFDDCSPSVAAVVGSINWPEANRYVS 765

  Fly   672 KAVVQTKREEIVNGLSASFEIALKMYRKRNGKLPTNIIIYRDGIGDGQLYTCLNYEIPQFEMVCG 736
            :...||.|:||:..|....:..|..:.|...|||..||.:|||:.:.|....|..|:...:..|.
plant   766 RMRSQTHRQEIIQDLDLMVKELLDDFYKAVKKLPNRIIFFRDGVSETQFKKVLQEELQSIKTACS 830

  Fly   737 N----RIKISYIVVQKRINTRIFSGSGIHLENPLPGTVVDQHITKSNMYDFFLVSQLVRQGTVTP 797
            .    ...|::.|||||.:||:|.....| ||..||||||..||....:||:|.|.|..:||..|
plant   831 KFQDYNPSITFAVVQKRHHTRLFRCDPDH-ENIPPGTVVDTVITHPKEFDFYLCSHLGVKGTSRP 894

  Fly   798 THYVVLRDDCNYGPDIIQKLSYKLCFLYYNWAGTVRIPACCMYAHKLAY 846
            |||.:|.|:..:..|.:|:|.|.||:.:......:.|.....|||..||
plant   895 THYHILWDENEFTSDELQRLVYNLCYTFVRCTKPISIVPPAYYAHLAAY 943

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AGO3NP_001036627.2 PAZ 291..425 CDD:198017 33/155 (21%)
Piwi_piwi-like_Euk 412..850 CDD:240016 126/470 (27%)
AGO7NP_177103.1 ArgoN 220..306 CDD:465134 17/91 (19%)
ArgoL1 316..366 CDD:462567 7/49 (14%)
PAZ 378..501 CDD:460472 32/142 (23%)
Piwi_ago-like 532..949 CDD:240015 118/432 (27%)

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