DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AGO3 and AGO3

DIOPT Version :9

Sequence 1:NP_001036627.2 Gene:AGO3 / 3355150 FlyBaseID:FBgn0250816 Length:867 Species:Drosophila melanogaster
Sequence 2:NP_174414.1 Gene:AGO3 / 840017 AraportID:AT1G31290 Length:1194 Species:Arabidopsis thaliana


Alignment Length:895 Identity:205/895 - (22%)
Similarity:360/895 - (40%) Gaps:201/895 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 HTS--NQFIT-----SESKENITKKTKGPESEAIASENGLFFPDLIYGSKGSSVNIYCNYLKLTT 139
            ||:  :|.:|     |:.||.:.:..||...:.                || .:|:..|:.:::.
plant   313 HTASGSQVMTPKPSSSDKKEPVKRPDKGGNIKV----------------KG-VINLSVNHFRVSF 360

  Fly   140 DESKGVFNYEV------------RFFPPIDSVHLRIKYLNDHKDKLGGTKTFDG-NTLYLPILLP 191
            .....:.:|:|            ||    :...::.|...|:.|.......:|| ..::..:.||
plant   361 STESVIRHYDVDIKGENSSKKISRF----ELAMVKEKLFKDNNDFPNAMTAYDGQKNIFSAVELP 421

  Fly   192 -NKMTVFISKAEDVELQIRILYKKKEEMRNCTQLYNILFDRVMKVLNYVKF--DRKQFDP----- 248
             ....|..|:.|::             ||..:..:.|...:.:|:|:...:  .|..|.|     
plant   422 TGSFKVDFSETEEI-------------MRGRSYTFIIKQVKELKLLDLQAYIDGRSTFIPRDVLQ 473

  Fly   249 -------SRP--KIIPLAK------LEVWPGYVTAVDEYKG----------GLMLCCDVSHRILC 288
                   ..|  ::|.:.|      ||:..||  .|...||          ||.||.:.|  :|.
plant   474 GMDVVMKEHPSKRMITVGKRFFSTRLEIDFGY--GVGAAKGFHHTLKPTVQGLSLCLNSS--LLA 534

  Fly   289 QKTVLEML--VDLY--QQNVEHYQ----ESARKMLVGNIVLTRYNNRTYKI----------NDIC 335
            .:..:.::  :.||  .:|:..::    :...:.|:|..|...:.....|.          .||.
plant   535 FRKAISVIEYLKLYFGWRNIRQFKNCRPDDVVQELIGLKVTVDHRKTKQKFIIMGLSKDDTKDIK 599

  Fly   336 FD------QNPTCQFEIKTGCTSYVEYYKQYHNINIKDVNQPLIYSIKKSRGIPAEREN---LQF 391
            ||      ..|..:..|       |||:|:.:..:|...:.|.:...||.      |||   ::|
plant   600 FDFIDHAGNQPPRKISI-------VEYFKEKYGRDIDHKDIPCLNLGKKG------RENFVPMEF 651

  Fly   392 CLIPELCYLTGLRDEVRSDNKLMREIATFTR----VSPNQRQMALNKFYENVSNTPAAQEILNSW 452
            |.:.|        .::....||.|:.|.:.:    |:|.||...:||..:: |:.|...:|:.::
plant   652 CNLVE--------GQIFPKEKLYRDSAAWLKELSLVTPQQRLENINKMIKS-SDGPRGGDIIGNF 707

  Fly   453 GLSLTNNSNKISGRQMDIEQIYFSKISVSAGR-------SAEFSKHAVTNEMLKVVHLSKWIIIH 510
            ||.:..|...:.||.::...:   |::...|.       |.....:..|..:.|...:..|.::.
plant   708 GLRVDPNMTTVEGRVLEAPTL---KLTDRRGNPIHEKLMSESNQWNLTTKGVTKGSIIKHWAVLD 769

  Fly   511 LRNYRQAATSL--------LDNMKQACESLGMNISNP------TMISL-DHDRIDAYIQALRRNI 560
            .    .|:.||        ::.:.:.|:.|||.:..|      :|.:| |.:.::..::::....
plant   770 F----TASESLKKKMPGYFVNKLIERCKGLGMQMEAPIVCKTSSMETLYDGNALEELLRSVIDEA 830

  Fly   561 TMN-----TQMVVCICHNRRDDRYAAIKKICCSEIPIPSQ-VINAKTLQNDLKIRSVVQKIVLQM 619
            :.|     ..:|:|....:.|. |..:|.|..:::.:.:| .:....::.:......:..:.|::
plant   831 SHNHGGACPTLVLCAMTGKHDG-YKTLKWIAETKLGLVTQCFLTISAIKGETVSDQYLANLALKI 894

  Fly   620 NCKLGGSLWTVKIP------FK---NVMICGIDSYHDPS--NRGNSVAAFVASINSSYSQWYSKA 673
            |.|:||:  .|::.      ||   .||..|.|..|..:  |...|:.|.|.::|...:..|:..
plant   895 NAKVGGT--NVELVDNIFSFFKKEDKVMFIGADVNHPAAHDNMSPSIVAVVGTLNWPEANRYAAR 957

  Fly   674 V-VQTKREEIVNGLSASFEIALKMYRKRNGKLPTNIIIYRDGIGDGQLYTCLNYEIPQFEMV--- 734
            | .|:.|:|.:.|...:....::.:.:...|.|..|:|:|||:.|||....||.|:...:.|   
plant   958 VKAQSHRKEEIQGFGETCWELIEAHSQAPEKRPNKIVIFRDGVSDGQFDMVLNVELQNVKDVFAK 1022

  Fly   735 CGNRIKISYIVVQKRINTRIF----SGSGIHLENPLPGTVVDQHITKSNMYDFFLVSQLVRQGTV 795
            .|...:|:.||.|||..||.|    |..|....|...|||||..|.....|||:|.||....||.
plant  1023 VGYNPQITVIVAQKRHQTRFFPATTSKDGRAKGNVPSGTVVDTTIIHPFEYDFYLCSQHGAIGTS 1087

  Fly   796 TPTHYVVLRDDCNYGPDIIQKLSYKLCFLYYNWAGTVRIPACCMYAHKLA 845
            .||||.||.|:..:..:.||||.:.|||.:......|.:.....||.|.|
plant  1088 KPTHYYVLSDEIGFNSNQIQKLIFDLCFTFTRCTKPVALVPPVSYADKAA 1137

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AGO3NP_001036627.2 PAZ 291..425 CDD:198017 32/164 (20%)
Piwi_piwi-like_Euk 412..850 CDD:240016 127/485 (26%)
AGO3NP_174414.1 PLN03202 318..1138 CDD:215631 202/888 (23%)
ArgoN 336..479 CDD:293095 25/158 (16%)
PAZ 560..663 CDD:280352 29/125 (23%)
Piwi_ago-like 703..1144 CDD:240015 109/421 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54391
OrthoDB 1 1.010 - - D220258at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.890

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