DRSC/TRiP Functional Genomics Resources

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Protein Alignment AGO3 and piwil2

DIOPT Version :10

Sequence 1:NP_001036627.2 Gene:AGO3 / 3355150 FlyBaseID:FBgn0250816 Length:867 Species:Drosophila melanogaster
Sequence 2:NP_001352553.2 Gene:piwil2 / 572134 ZFINID:ZDB-GENE-060526-345 Length:1046 Species:Danio rerio


Alignment Length:884 Identity:313/884 - (35%)
Similarity:480/884 - (54%) Gaps:37/884 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 GRGNLLSLFNKNAGNMGKSISSKDHEIDSGLDFNNSESSGERLLSSHNIETDLITTLQHVNISVG 67
            |||        .||:||..:..|...|.:.|.....|...|..:|...............:::||
Zfish   181 GRG--------AAGDMGADLQPKPTIIGASLTPEREEVRSEESISFLGRGFTGFGRAAMPHMTVG 237

  Fly    68 RGRARLIDTLKTDDHTSNQF---ITSESKENITKKTKGPESEAIASENGLFFPDLIYGSKGSSVN 129
            ||.   |..|......:..|   ..|.|.|:.......|....:..|. :..|....|:|||.:.
Zfish   238 RGP---IGPLSPSPSVAAPFSLISASSSSEDAPVAPGTPPKVEVKIET-VKEPLQKIGTKGSPIP 298

  Fly   130 IYCNYLKLTTDESKGVFNYEVRFFPPIDSVHLRIKYLNDHKDKLGGTKTFDGNTLYLPILLPNKM 194
            |..||:.:.. ::..||.|.|.|.|.::|:.:|...:.:|:...|....|||:.||||..|..  
Zfish   299 IGSNYIPICC-KNDAVFQYHVTFTPNVESLSMRFGMMKEHRPTTGEVVAFDGSILYLPKRLEE-- 360

  Fly   195 TVFISKAE--------DVELQIRILYKKKEEMRNCTQLYNILFDRVMKVLNYVKFDRKQFDPSRP 251
             |...|||        |:::|:..:.....::  |...||::..||||:|......|..:||:..
Zfish   361 -VVHLKAERKTDNQEIDIKIQLTKILPPSSDL--CIPFYNVVLRRVMKILGLKLVGRNHYDPNAV 422

  Fly   252 KIIPLAKLEVWPGYVTAVDEYKGGLMLCCDVSHRILCQKTVLEMLVDLYQQNVEHYQESARKMLV 316
            .|:...:|:|||||.|::....|||.|..||||::|...:||:::..:||.:.|.:|:...|..|
Zfish   423 VILGKHRLQVWPGYSTSIKHTDGGLYLVVDVSHKVLRNDSVLDVMNLIYQGSRESFQDECTKEFV 487

  Fly   317 GNIVLTRYNNRTYKINDICFDQNPTCQFEIKTG-CTSYVEYYKQYHNINIKDVNQPLIYSIKKSR 380
            |:||:||||||||:|:||.:.::|...|.:..| .|::|:||::.:.|.||:::|||:....|.|
Zfish   488 GSIVITRYNNRTYRIDDIEWSKSPKDTFTLADGSVTTFVDYYRKNYGITIKELDQPLLIHRPKER 552

  Fly   381 GIPAERE-NLQFCLIPELCYLTGLRDEVRSDNKLMREIATFTRVSPNQRQMALNKFYENVSNTPA 444
            ..|..:. ..:..|:|||.::||:.:::|.|.:.|:::.....|...|...:|.:...|:::...
Zfish   553 SRPGGKVITGEILLLPELSFMTGIPEKMRKDFRAMKDLTMHINVGAQQHTQSLKQLLHNINSNNE 617

  Fly   445 AQEILNSWGLSLTNNSNKISGRQMDIEQIYFSKISVSAGRSAEFSKHAVTNEMLKVVHLSKWIII 509
            |...|..||||::.......||.:..|.|.....|.....:.::|:..|.:..:..|.|:.|.:.
Zfish   618 ALSELGRWGLSISQEILVTQGRTLPSETICLHSASFVTSPAVDWSRELVRDPSISTVPLNCWAVF 682

  Fly   510 HLRNYRQAATSLLDNMKQACESLGMNISNPTMISLDHDRIDAYIQALRRNITM--NTQMVVCICH 572
            :.|.....|..|:....:....:||.:..|..:.|..||.:.:::::...:|.  ..|:||||..
Zfish   683 YPRRATDQAEELVTTFSRVAGPMGMRVERPIRVELRDDRTETFVKSIHSQLTSEPRVQLVVCIMT 747

  Fly   573 NRRDDRYAAIKKICCSEIPIPSQVINAKTLQNDLKIRSVVQKIVLQMNCKLGGSLWTVKIPFKNV 637
            ..|||.|:||||:||.:.|:|||.||.:|:....|:|||.|||:||:||||||.||||.:|.|.:
Zfish   748 GNRDDLYSAIKKLCCIQSPVPSQAINVRTISQPQKLRSVAQKILLQINCKLGGELWTVNVPLKYL 812

  Fly   638 MICGIDSYHDPSNRGNSVAAFVASINSSYSQWYSKAVVQTKREEIVNGLSASFEIALKMYRKRNG 702
            |:.|:|.:||.|.:..||..||||:||..::|||:...|...|||:||.......||:.|.:.|.
Zfish   813 MVIGVDVHHDTSKKSRSVMGFVASLNSMLTKWYSRVTFQMPNEEIINGFRVCLLAALQKYYEVNH 877

  Fly   703 KLPTNIIIYRDGIGDGQLYTCLNYEIPQ----FEMVCGNRIKISYIVVQKRINTRIFSGSGIHLE 763
            ..|..|:|||||:.||||.|..:|||||    ||.:.....|:::|||||||:|.::|....|..
Zfish   878 AFPEKIVIYRDGVSDGQLKTVEHYEIPQILKCFETIPNYEPKLAFIVVQKRISTTLYSYGSDHFG 942

  Fly   764 NPLPGTVVDQHITKSNMYDFFLVSQLVRQGTVTPTHYVVLRDDCNYGPDIIQKLSYKLCFLYYNW 828
            .|.||||:|..:|..:..||:|::..:|||...||||:.:.:..|..||.:|:|::|:|.||:||
Zfish   943 TPSPGTVLDHTVTNRDWVDFYLMAHSIRQGCGLPTHYITVYNTANLTPDHLQRLTFKMCHLYWNW 1007

  Fly   829 AGTVRIPACCMYAHKLAYLIGQSIQRDVAEALSEKLFYL 867
            .||:|:||.|.||||||:|.||.:..:.|..||||||:|
Zfish  1008 PGTIRVPAPCKYAHKLAFLSGQYLHSEPAIQLSEKLFFL 1046

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AGO3NP_001036627.2 PAZ 291..425 CDD:198017 48/135 (36%)
Piwi_piwi-like_Euk 412..850 CDD:240016 172/443 (39%)
piwil2NP_001352553.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..35
Blue background indicates that the domain is not in the aligned region.

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