DRSC/TRiP Functional Genomics Resources

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Protein Alignment AGO3 and Piwil4

DIOPT Version :9

Sequence 1:NP_001036627.2 Gene:AGO3 / 3355150 FlyBaseID:FBgn0250816 Length:867 Species:Drosophila melanogaster
Sequence 2:NP_001355760.1 Gene:Piwil4 / 330890 MGIID:3041167 Length:848 Species:Mus musculus


Alignment Length:886 Identity:293/886 - (33%)
Similarity:477/886 - (53%) Gaps:57/886 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSGRGNLLS---LFNKNAGNMGKSISSKDHEIDSGLDFNNSESSGERLLSSHNIETDLITTLQHV 62
            ||||..:.:   ....:|..:|:  ||:|..:.|... .:||:.|         .|.:|:....:
Mouse     1 MSGRARVRARGITTGHSAREVGR--SSRDLMVTSASP-GDSEAGG---------GTSVISQPYEL 53

  Fly    63 NISVGRGRARLIDTLKTDDHTSNQFITSESKENITKKTKG----PESEAIASENGLFFPDLIYGS 123
            .:|.|.|....::                      ::.||    .|......|......|...||
Mouse    54 GVSSGDGGRTFME----------------------RRGKGRQDFEELGVCTREKLTHVKDCKTGS 96

  Fly   124 KGSSVNIYCNYLKLTTDESKGVFNYEVRFFPPIDSVHLRIKYLNDHKDKLGGTKTFDGNTLYLPI 188
            .|..|.:..|...|...:...::.|.|.:.|.:.|..|||..|.:|.......|.|||.:|:|..
Mouse    97 SGIPVRLVTNLFNLDLPQDWQLYQYHVTYSPDLASRRLRIALLYNHSILSDKAKAFDGASLFLSE 161

  Fly   189 LLPNKMTVFIS---KAEDVELQIRILYKKKEEMRNCTQLYNILFDRVMKVLNYVKFDRKQFDPSR 250
            .|..|:|...|   :.|.:::.:.:..|.......|.|.:|::|.:::|.|:..:..|..:.||.
Mouse   162 KLDQKVTELTSETQRGETIKITLTLTSKLFPNSPVCIQFFNVIFRKILKNLSMYQIGRNFYKPSE 226

  Fly   251 PKIIPLAKLEVWPGYVTAVDEYKGGLMLCCDVSHRILCQKTVLEMLVDL-YQQNVEHYQESARKM 314
            |..||..||.:|||:..:|..::..|:...||::::|..:|||:.:.|| .:..:..:.|...|.
Mouse   227 PVEIPQYKLSLWPGFAISVSHFESKLLFNADVNYKVLRNETVLDFMTDLCLRTGMSCFTEMCHKQ 291

  Fly   315 LVGNIVLTRYNNRTYKINDICFDQNPTCQFEIKTGC-TSYVEYYKQYHNINIKDVNQPLIYS-IK 377
            |||.:|||||||:||:|:||.:...||..|:.:.|. .:||:||||.::|.:.|:|||::.| :|
Mouse   292 LVGLVVLTRYNNKTYRIDDIDWSVKPTQAFQKRDGSEVTYVDYYKQQYDITLSDLNQPVLVSLLK 356

  Fly   378 KSRGIPAERENLQFCLIPELCYLTGLRDEVRSDNKLMREIATFTRVSPNQRQMALNKFYENVSNT 442
            :.|...:|.:.:.  |:||||:||||..:..||.:||:.:|..||:||..||..|.:..:::...
Mouse   357 RKRNDNSEPQMVH--LMPELCFLTGLSSQATSDFRLMKAVAEETRLSPVGRQQQLARLVDDIQRN 419

  Fly   443 PAAQEILNSWGLSLTNNSNKISGRQMDIEQIYFSKISVSAGRSAEFSKHAVTNEMLKVVHLSKWI 507
            |.|:..|.:|||.. .:...::||.:..|:|.....:.....:|::||...:.::|....|::|:
Mouse   420 PVARFELETWGLHF-GSQLSLTGRVVPSEKILLQDHTCQPAFAADWSKDMRSCKVLSSQPLNRWL 483

  Fly   508 IIHLRNYRQAATSLLDNMKQACESLGMNISNPTMISLDHDRIDAYIQALRRNITMNTQMVVCICH 572
            |:..........:.|..:::...|:|.|:..|.:|.:| :...|:::|::.:...:.|:|:||..
Mouse   484 IVCCNRAEHLIEAFLSCLRRVGGSMGFNVGYPKIIKVD-ETPAAFLRAIQVHGDPDVQLVMCILP 547

  Fly   573 NRRDDRYAAIKKICCSEIPIPSQVINAKTLQNDLKIRSVVQKIVLQMNCKLGGSLWTVKIPFKNV 637
            :.:.:.|.:|||...|:.|:|||.:..:||.....:.||..||.:||.|||||.||:|:||.|::
Mouse   548 SNQKNYYDSIKKYLSSDCPVPSQCVLTRTLNKQGTMLSVATKIAMQMTCKLGGELWSVEIPLKSL 612

  Fly   638 MICGIDSYHDPSNRGNSVAAFVASINSSYSQWYSKAVVQTKREEIVNGLSASFEIALKMYRKRNG 702
            |:.|||...|..|:...|..|||||||..::|:|:.|:|....:|.:.|......||..:.:.|.
Mouse   613 MVVGIDICRDALNKNVVVVGFVASINSRITRWFSRCVLQRTAADIADCLKVCMTGALNRWYRHNH 677

  Fly   703 KLPTNIIIYRDGIGDGQLYTCLNYEIPQF---EMVCGN---RIKISYIVVQKRINTRIFSGSGIH 761
            .||..|::||||:|:|||...|.||:||.   ...||:   ..::|.:||:||...|:|:.:...
Mouse   678 DLPARIVVYRDGVGNGQLKAVLEYEVPQLLKSVTECGSDARSCRLSVVVVRKRCLLRLFASTDHT 742

  Fly   762 LENPLPGTVVDQHITKSNMYDFFLVSQLVRQGTVTPTHYVVLRDDCNYGPDIIQKLSYKLCFLYY 826
            ::||..|||||...|:...|||:|:||...:|||:||||.|:.||....||.:|:|::|||.|||
Mouse   743 VQNPPLGTVVDSEATRPEWYDFYLISQTANRGTVSPTHYNVIYDDNALKPDHMQRLTFKLCHLYY 807

  Fly   827 NWAGTVRIPACCMYAHKLAYLIGQSIQRDVAEALSEKLFYL 867
            ||.|.:.:||.|.|||||.:|:.||:.::.:..|:..||||
Mouse   808 NWQGLISVPAPCQYAHKLTFLVAQSVHKEPSLELANNLFYL 848

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AGO3NP_001036627.2 PAZ 291..425 CDD:198017 57/136 (42%)
Piwi_piwi-like_Euk 412..850 CDD:240016 162/443 (37%)
Piwil4NP_001355760.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..52 15/62 (24%)
PAZ 266..403 CDD:198017 58/138 (42%)
Piwi_piwi-like_Euk 389..831 CDD:240016 162/443 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837111
Domainoid 1 1.000 310 1.000 Domainoid score I1322
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 615 1.000 Inparanoid score I894
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54391
OrthoDB 1 1.010 - - D220258at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm42534
orthoMCL 1 0.900 - - OOG6_100694
Panther 1 1.100 - - O PTHR22891
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X548
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.910

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