DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AGO3 and piwil3

DIOPT Version :9

Sequence 1:NP_001036627.2 Gene:AGO3 / 3355150 FlyBaseID:FBgn0250816 Length:867 Species:Drosophila melanogaster
Sequence 2:XP_031752134.1 Gene:piwil3 / 100496286 XenbaseID:XB-GENE-6469412 Length:869 Species:Xenopus tropicalis


Alignment Length:831 Identity:314/831 - (37%)
Similarity:482/831 - (58%) Gaps:67/831 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 QHVNISVGRGRAR-----LIDTLKTDDHTSNQFITSESKENITKKTKGPESEAIASENGLFFPDL 119
            |.|.||...||.|     .::|.:|.:|.         ||:.|                      
 Frog    83 QEVTISERGGRRRDFHDLGVNTRQTIEHV---------KESKT---------------------- 116

  Fly   120 IYGSKGSSVNIYCNYLKLTTDESKGVFNYEVRFFPPIDSVHLRIKYLNDHKDKLGGTKTFDGNTL 184
              |..||::.:..|::||.:.....::.|.:.:.|.::|..||...|..|::.:|..:.|||..|
 Frog   117 --GVSGSTIQLSTNHIKLVSRPQWVLYQYHIDYNPQMESRRLRTALLYQHEELIGKARAFDGTML 179

  Fly   185 YLPILLPNKMTVFISK---AEDVELQIRILYKKKEEMRNCTQLYNILFDRVMKVLNYVKFDRKQF 246
            :.|..| ||.|...|:   .|:|::.|.:..:.......|.|.|||:|.|::|::|..:..|..:
 Frog   180 FAPKRL-NKATEVFSQTRNGENVKITITLTNELPPTSPTCFQFYNIIFRRLLKMMNMKQIGRNYY 243

  Fly   247 DPSRPKIIPLAKLEVWPGYVTAVDEYKGGLMLCCDVSHRILCQKTVLEMLVDLYQQNVEH-YQES 310
            :||.|..|....|.:|||:.|::.:|:..:||..||||::|..:|||:::..||:.:.:. :.::
 Frog   244 NPSDPIEISQHNLTIWPGFTTSILQYETSIMLSLDVSHKVLRSETVLDVMTKLYRMHGDRDFADA 308

  Fly   311 ARKMLVGNIVLTRYNNRTYKINDICFDQNPTCQFEIKTGC-TSYVEYYKQYHNINIKDVNQPLIY 374
            ..|.|:|.||||:|||:||:|::||::..|...|:...|. .|:|:||:..:|..|:|:.|.||.
 Frog   309 VTKELLGQIVLTKYNNKTYRIDEICWNMTPQSTFKKSDGSDISFVDYYRMQYNKEIRDLRQALIA 373

  Fly   375 SIKKSRGIPAERENLQFCLIPELCYLTGLRDEVRSDNKLMREIATFTRVSPNQRQMALNKFYENV 439
            :|  .|.:....:.....|:||||.||||.|.:|:|..:||::|..||:.|:||:..:.:|...:
 Frog   374 NI--PRRVRPGGDTGPIVLVPELCNLTGLTDRMRNDFGVMRDLAVHTRLPPDQREKQVARFLNYI 436

  Fly   440 SNTPAAQEILNSWGLSLTNNSNKISGRQMDIEQIYFSKISVSAGRSAEF-------SKHAVTNEM 497
            ......|:.|..|||:.........||....|:|      :.|||:|::       |:......:
 Frog   437 HKDENVQKELRDWGLNFDKQLLPFVGRVSPPERI------LQAGRTADYNPQFADWSREMRGQTL 495

  Fly   498 LKVVHLSKWIIIHLRNYRQAATSLLDNMKQACESLGMNISNPTMISLDHDRIDAYIQALRRNITM 562
            :.|.||..|::::.|....||.:|:..:.:..:.:||.::|..|..:| ||.::|||.|...:..
 Frog   496 ISVRHLDNWMLLYPRRCYDAAQTLVQTLNKVAQQIGMRMNNVRMFEVD-DRANSYIQVLNAEVNP 559

  Fly   563 NTQMVVCICHNRRDDRYAAIKKICCSEIPIPSQVINAKTLQNDLKIRSVVQKIVLQMNCKLGGSL 627
            :||||||:..:...::|.:|||..|.:||.|||.:.|:||.....:.||..||.:|||||:||.|
 Frog   560 DTQMVVCVLSSIHKEKYDSIKKYLCLQIPTPSQCVVARTLSKPQTVLSVATKIAMQMNCKMGGEL 624

  Fly   628 WTVKIPFKNVMICGIDSYHDPSNRGNSVAAFVASINSSYSQWYSKAVVQTKREEIVNGLSASFEI 692
            |:|:||...:|:.|||.|||..:...|:|.||||:|.:.::|||:.|:|.:::|||:||....:.
 Frog   625 WSVEIPLGEMMVIGIDCYHDTLSGKRSIAGFVASMNRNLTRWYSRCVLQDQKQEIVDGLKVCLQA 689

  Fly   693 ALKMYRKRNGKLPTNIIIYRDGIGDGQLYTCLNYEIPQFEMVCGNRI------KISYIVVQKRIN 751
            :|..:...|..||:.|:|||||:|||||.|.:||||||| :.|....      |:|.|||:||||
 Frog   690 SLHAWFNCNKNLPSRILIYRDGVGDGQLKTLVNYEIPQF-LDCIKSAGRDYCPKLSIIVVKKRIN 753

  Fly   752 TRIFSGSGIHLENPLPGTVVDQHITKSNMYDFFLVSQLVRQGTVTPTHYVVLRDDCNYGPDIIQK 816
            .|.|:..|..::||.||||||..:|:...||||:|||.||||||:||||.|:.|.....||.:|:
 Frog   754 ARFFAHLGGRIQNPPPGTVVDVEVTRPEWYDFFIVSQSVRQGTVSPTHYNVVYDSSGLKPDYMQR 818

  Fly   817 LSYKLCFLYYNWAGTVRIPACCMYAHKLAYLIGQSIQRDVAEALSEKLFYL 867
            |:||||.|||||.|.:|:||.|.||||||:|:||||.::...|||.:|:||
 Frog   819 LTYKLCHLYYNWPGVIRVPAPCQYAHKLAFLVGQSIHKEPHLALSNRLYYL 869

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AGO3NP_001036627.2 PAZ 291..425 CDD:198017 52/135 (39%)
Piwi_piwi-like_Euk 412..850 CDD:240016 190/450 (42%)
piwil3XP_031752134.1 GAGE <75..117 CDD:399085 13/66 (20%)
PAZ 287..423 CDD:198017 52/137 (38%)
Piwi_piwi-like_Euk 410..852 CDD:240016 190/449 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 310 1.000 Domainoid score I1312
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 579 1.000 Inparanoid score I1015
OMA 1 1.010 - - QHG54391
OrthoDB 1 1.010 - - D220258at2759
OrthoFinder 1 1.000 - - FOG0003636
OrthoInspector 1 1.000 - - otm47634
Panther 1 1.100 - - O PTHR22891
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3665
SonicParanoid 1 1.000 - - X548
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.110

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