DRSC/TRiP Functional Genomics Resources

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Protein Alignment AGO3 and piwil1

DIOPT Version :9

Sequence 1:NP_001036627.2 Gene:AGO3 / 3355150 FlyBaseID:FBgn0250816 Length:867 Species:Drosophila melanogaster
Sequence 2:XP_002940227.2 Gene:piwil1 / 100488735 XenbaseID:XB-GENE-963233 Length:861 Species:Xenopus tropicalis


Alignment Length:766 Identity:306/766 - (39%)
Similarity:468/766 - (61%) Gaps:31/766 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 GSKGSSVNIYCNYLKLTTDESKGVFNYEVRFFPPIDSVHLRIKYLNDHKDKLGGTKTFDGNTLYL 186
            ||.||.:.:..|::||.:.....:|.|.:.:.|.::|..||...|..|::.:|..:.|||..|:|
 Frog   107 GSSGSIIQLSTNHIKLISRPQWVLFQYHIDYAPQMESRGLRCALLFQHEELIGKARAFDGTMLFL 171

  Fly   187 PILLPNKMTVF--ISKAEDVELQIRILYKKKEEMRNCTQLYNILFDRVMKVLNYVKFDRKQFDPS 249
            |..|.....||  ....|.|::.|.:..:.......|.|.|||:|.|::|::|..:..|..::|:
 Frog   172 PKRLDKVNEVFSQTRNGETVKITITLTNELPPTSPTCFQFYNIIFRRLLKMMNMKQIGRNYYNPN 236

  Fly   250 RPKIIPLAKLEVWPGYVTAVDEYKGGLMLCCDVSHRILCQKTVLEMLVDLYQQNVEH-YQESARK 313
            ....|....|.::||:.|::.:|:..:||..||||::|..:|||:.:.::.|:...| :.:...|
 Frog   237 DQIEISSHGLTIYPGFSTSILQYENNIMLSIDVSHKVLRSETVLDYMYNVNQKVESHKFHDICSK 301

  Fly   314 MLVGNIVLTRYNNRTYKINDICFDQNPTCQFEIKTGC-TSYVEYYKQYHNINIKDVNQP-LIYSI 376
            .|:|.||||:|||:||:|:||.:|..|...|:...|. .|:|:||:..:|..|.|:||| |:::.
 Frog   302 DLIGQIVLTKYNNKTYRIDDINWDFTPESTFKKSDGSEISFVDYYRTQYNKGITDLNQPALVHNP 366

  Fly   377 KKSRG---IPAERENLQFCLIPELCYLTGLRDEVRSDNKLMREIATFTRVSPNQRQMALNKFYEN 438
            ||.||   :||.    ...||||.|:||||.|.:|||..:|:::|..||::|.||::.:.||.:|
 Frog   367 KKPRGPQNVPAG----PILLIPEFCFLTGLTDRMRSDFNVMKDLAIHTRLAPEQREIQVGKFLKN 427

  Fly   439 VSNTPAAQEILNSWGLSLTNNSNKISGRQMDIEQIYFSKISVSAGRSAEF-------SKHAVTNE 496
            :....:.|:.|..|||:..:.....:||....|:|      :.||::|::       |:......
 Frog   428 IHKDDSVQKELQDWGLNFDSKLLPFAGRVAPAEKI------LQAGKTADYNPQFADWSRELRGPT 486

  Fly   497 MLKVVHLSKWIIIHLRNYRQAATSLLDNMKQACESLGMNISNPTMISLDHDRIDAYIQALRRNIT 561
            :::|.||..|::::.|....||.:|..|:.:....:|:.::...|:.:| |..|||::.|::.:|
 Frog   487 LIRVKHLDNWVLLYTRRNYDAANTLTQNLFKVSGQMGIKMNRAVMVEVD-DTTDAYVKVLQQKVT 550

  Fly   562 MNTQMVVCICHNRRDDRYAAIKKICCSEIPIPSQVINAKTLQNDLKIRSVVQKIVLQMNCKLGGS 626
            .:.|||||:..:.|.|:|.||||..|.:.|:|||.:.||||.....:.||..||.||||||:||.
 Frog   551 PDVQMVVCLLSSNRKDKYDAIKKYLCIDCPVPSQCVLAKTLNKPQTVVSVATKIALQMNCKMGGE 615

  Fly   627 LWTVKIPFKNVMICGIDSYHDPSNRGNSVAAFVASINSSYSQWYSKAVVQTKREEIVNGLSASFE 691
            ||||:||.|.:||.|||.|||..:...|:.|||||:|.|.::|:|:.|:|.:::|||:||.....
 Frog   616 LWTVEIPLKELMIVGIDCYHDTLSGKRSIGAFVASLNPSMTRWFSRCVLQAQKQEIVDGLKVCMH 680

  Fly   692 IALKMYRKRNGKLPTNIIIYRDGIGDGQLYTCLNYEIPQFEMVCGN-----RIKISYIVVQKRIN 751
            .|||.:...|..||:.|||||||:|||||.|.:.|||||.:....:     ..|::.|||:||::
 Frog   681 AALKAWFNCNKSLPSRIIIYRDGVGDGQLKTMVEYEIPQLQDCIRSAEKDYSPKLTVIVVKKRVS 745

  Fly   752 TRIFSGSGIHLENPLPGTVVDQHITKSNMYDFFLVSQLVRQGTVTPTHYVVLRDDCNYGPDIIQK 816
            .|.|:..|..|:||.|||:||..||:...||||::||.||.|:|:||||.|:.|.....||.:|:
 Frog   746 ARFFAHVGGRLQNPPPGTIVDVEITRPEWYDFFIISQSVRVGSVSPTHYNVVYDSGALKPDHMQR 810

  Fly   817 LSYKLCFLYYNWAGTVRIPACCMYAHKLAYLIGQSIQRDVAEALSEKLFYL 867
            |:||||.|||||.|.:|:||.|.||||||:|:||||.|:....||::|:||
 Frog   811 LTYKLCHLYYNWPGVIRVPAPCQYAHKLAFLVGQSIHREPHLTLSDRLYYL 861

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AGO3NP_001036627.2 PAZ 291..425 CDD:198017 58/139 (42%)
Piwi_piwi-like_Euk 412..850 CDD:240016 190/449 (42%)
piwil1XP_002940227.2 GAGE 16..107 CDD:368631 306/766 (40%)
ArgoL1 227..273 CDD:370073 14/45 (31%)
PAZ_piwi_like 276..393 CDD:239211 49/120 (41%)
Piwi_piwi-like_Euk 401..844 CDD:240016 190/449 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54391
OrthoDB 1 1.010 - - D220258at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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