DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12547 and AT1G56500

DIOPT Version :9

Sequence 1:NP_001036460.1 Gene:CG12547 / 3355145 FlyBaseID:FBgn0250830 Length:717 Species:Drosophila melanogaster
Sequence 2:NP_564718.2 Gene:AT1G56500 / 842103 AraportID:AT1G56500 Length:1055 Species:Arabidopsis thaliana


Alignment Length:724 Identity:267/724 - (36%)
Similarity:381/724 - (52%) Gaps:109/724 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LLQAYKSSKGENEKAGTIVKFLDRWNDDISIAKLKDLTVEFESDLEWFNVSCPLSI-KGLQGKVI 83
            |:.|...|..:|:..|.:.:|:| :..|:...:......||.|.|:|.| :.||.. :.|:|||:
plant   360 LVGAKSPSFTQNQGEGRVQQFVD-YIADLESKQTATTVPEFPSKLDWLN-TAPLQFRRDLKGKVV 422

  Fly    84 ILDFFTYCCINCMHVLQELHLLEERFPIESGVVVIGVHSPKFENERNAANILSAVQRYGISHPIV 148
            ||||:|||||||||||.:|..||:::. :....|:||||.||:||::...|.:||.||.||||:|
plant   423 ILDFWTYCCINCMHVLPDLEFLEKKYK-DMPFTVVGVHSAKFDNEKDLDAIRNAVLRYDISHPVV 486

  Fly   149 NDSRSGMWRALGIRCWPSLLILSPTGVPMMLLMGEGHGKFLQDFFSSALSYFSRQGIIDHRGLPL 213
            ||....|||.|||..||:..::||.|..:..:.||||.|.|.|..::||:|:..:.::|...||.
plant   487 NDGDMYMWRELGINSWPTFAVVSPNGKVIAQIAGEGHRKDLDDVVAAALTYYGGKNVLDSTPLPT 551

  Fly   214 KLFNDFQP---ASNLRFPAKI-VQGPNGLYAIADTGNNRVLVLTAGG--VVQHRIGGHQPGFVDG 272
            :|..|..|   .|.|:||.|: :...|....|:|:.:||::|....|  :||....|.: ||.||
plant   552 RLEKDNDPRLATSPLKFPGKLAIDTLNNRLFISDSNHNRIIVTDLEGNFIVQIGSSGEE-GFQDG 615

  Fly   273 DLTVARFNNPQGIAF-LNENVLIVADTKNHAIRQISLTNAMVETLAGTGIQGNDRIGGRLGPLQP 336
            ....|.||.|||:|: ..:|:|.||||:|||:|:|...|..|:||||.|.:|:|..|||.|..|.
plant   616 SFEDAAFNRPQGLAYNAKKNLLYVADTENHALREIDFVNERVQTLAGNGTKGSDYQGGRKGTKQL 680

  Fly   337 LSSPWDVAIFRTRDMDMSFHLDERNIPEKTIILISMAGTHQIWGY-FPEGIIWWKFRKFEPCCCV 400
            |:|||||..              ..:.||  :.|:|||.||||.| ..:||.    |.|.     
plant   681 LNSPWDVCF--------------EPVNEK--VYIAMAGQHQIWEYSVLDGIT----RVFS----- 720

  Fly   401 SLIGNGLEENRNNSYPQNAAFAQPSGLAIAGDV--LYIADSESSSIRKASMIDGKVMPVVGGDRN 463
               |||.|.|.|.|.||..:||||||:::..|:  .|||||||||||...:..|....:.|||  
plant   721 ---GNGYERNLNGSTPQTTSFAQPSGISLGPDLKEAYIADSESSSIRALDLQTGGSRLLAGGD-- 780

  Fly   464 PL---NLFAFGDIDGRLFSAKLQHPLGV-TFNDTNNKLYVADTYNHKIKIIDIDSNDISTL---- 520
            |.   |||.|||.||......||||||| ..||  .::|:.|:||||||.:|..:..:.||    
plant   781 PYFSENLFKFGDNDGVGAEVLLQHPLGVLCAND--GQIYLTDSYNHKIKKLDPVTKRVVTLAGTG 843

  Fly   521 -------QIKSQENTNLILNEPAGLCLDASGRNLLVADTNNHSIHTIDL--------VTLIAQ-- 568
                   ::|..:     |:|||||.:..:|| |.||||||..|..|||        :||..:  
plant   844 KAGFKDGKVKGAQ-----LSEPAGLAITENGR-LFVADTNNSLIRYIDLNKGEDSEILTLELKGV 902

  Fly   569 ----PFGLDFRQIASASEIDAPQDTQKPTENNIVKALPLDLIKPSKIFFNLRLS--PRFNFTKEA 627
                |.....:::...:..|             .|.:.:|.:...:...||::|  ..::|:|||
plant   903 QPPTPKAKSLKRLRKRASAD-------------TKIVKVDSVTSREGDLNLKISLPDGYHFSKEA 954

  Fly   628 PQKWIVKTVCQ-SVIVNPTCGNLL-DG--MCHMQVQATRPDFMCESSQIFTIEFVLNLCLSN-CC 687
            ..|::|....: :|.::||.|.|. :|  |.|....:|       |:.:..|...:..|..: .|
plant   955 RSKFVVDVEPENAVAIDPTEGTLSPEGSTMLHFIQSST-------SASVGKISCKVYYCKEDEVC 1012

  Fly   688 LVKKITVSI 696
            |.:.:...:
plant  1013 LYQSVQFEV 1021

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12547NP_001036460.1 TlpA_like_DipZ_like 58..184 CDD:239310 63/126 (50%)
NHL <205..306 CDD:302697 42/107 (39%)
NHL repeat 227..271 CDD:271320 15/46 (33%)
NHL-2_like 262..618 CDD:271321 146/388 (38%)
NHL repeat 280..306 CDD:271320 15/26 (58%)
NHL repeat 282..324 CDD:271321 22/42 (52%)
NHL repeat 340..407 CDD:271321 21/67 (31%)
NHL repeat 424..470 CDD:271321 23/50 (46%)
NHL repeat 482..523 CDD:271321 20/52 (38%)
NHL repeat 534..569 CDD:271321 20/48 (42%)
AT1G56500NP_564718.2 PLN02919 1..1055 CDD:215497 267/724 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 117 1.000 Domainoid score I1961
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H12048
Inparanoid 1 1.050 369 1.000 Inparanoid score I569
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1145834at2759
OrthoFinder 1 1.000 - - FOG0006210
OrthoInspector 1 1.000 - - oto4265
orthoMCL 1 0.900 - - OOG6_104506
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4487
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.830

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