DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12547 and nhlrc2

DIOPT Version :9

Sequence 1:NP_001036460.1 Gene:CG12547 / 3355145 FlyBaseID:FBgn0250830 Length:717 Species:Drosophila melanogaster
Sequence 2:XP_009305038.3 Gene:nhlrc2 / 100535163 ZFINID:ZDB-GENE-100318-2 Length:719 Species:Danio rerio


Alignment Length:743 Identity:298/743 - (40%)
Similarity:413/743 - (55%) Gaps:101/743 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SPIDILTFITDELLQAYKSSKGENEKAGTIVKFLDRWNDDISIAKLKDLTV-EFESDLEWFNVSC 71
            |.:..|..|..:|....:.:..:.||...:.::|      :.|.:.:||.| :||..|||.|...
Zfish     5 SKLTDLFLIQGQLDCDLEETTSQEEKEKLVHEYL------LKIDEREDLIVPDFEEGLEWLNTDG 63

  Fly    72 PLSI-KGLQGKVIILDFFTYCCINCMHVLQELHLLEERFPIESGVVVIGVHSPKFENERNAANIL 135
            |||: |.|.|||::|||||||||||:|:|.:||.||:.:.|:.|::|:||||.||.||:...|:.
Zfish    64 PLSLRKELSGKVVLLDFFTYCCINCIHILPDLHQLEKNYSIQDGLIVVGVHSAKFPNEKVLQNVQ 128

  Fly   136 SAVQRYGISHPIVNDSRSGMWRALGIRCWPSLLILSPTGVPMMLLMGEGHGKFLQDFFSSALSYF 200
            |||.||.||||:||||.:.:|:.|.:.|||:|::|.|.|..:..|:||||.:.|..|.::||.::
Zfish   129 SAVLRYDISHPVVNDSDARLWQELEVSCWPTLVLLGPRGNLLFSLVGEGHREHLFLFTAAALKHY 193

  Fly   201 SRQGIIDHRGLPLKLFNDFQPASNLRFPAKIVQGPNG-LYAIADTGNNRVLVLTAGGVVQHRIGG 264
            ..||::....:.:||:.|..|.|.|.||.||...|:| ..||||||::||||::..|.|.|.:||
Zfish   194 REQGLLKDHNVGIKLYRDSLPPSILSFPGKIAIDPSGKQLAIADTGHHRVLVVSNTGQVLHTVGG 258

  Fly   265 HQPGFVDGDLTVARFNNPQGIAFLNENVLIVADTKNHAIRQISLTNAMVETLAGTGIQGNDRIGG 329
            ...|..||:|:.|:|::|||: |:..:.:.||||:||.:|:|:||...|.||||.|:||.|:.||
Zfish   259 PSSGKRDGNLSEAQFSSPQGL-FIKGDTVYVADTENHLVRKINLTEGKVSTLAGIGVQGTDKEGG 322

  Fly   330 RLGPLQPLSSPWDVAIFRTRDMDMSFHLDERNIPEKTIILISMAGTHQIWGYFPEGIIWWKFRKF 394
            .|||.||:||||||.:               ......::.|:||||||||..|.|.....|....
Zfish   323 ALGPQQPISSPWDVTL---------------GSAGGDVLWIAMAGTHQIWALFLEDGKLPKGSDS 372

  Fly   395 EPCCCVSLIGNGLEENRNNSYPQNAAFAQPSGLAIA----GDVLYIADSESSSIRKASMIDGKVM 455
            :...||...|:|.||||||:||..|..|||||||:|    .:.|:|||||||:||..|:.||.|.
Zfish   373 KAGTCVRFAGSGNEENRNNAYPHKAGLAQPSGLALAPTEPWESLFIADSESSTIRSLSLKDGAVK 437

  Fly   456 PVVGGDRNPLNLFAFGDIDGRLFSAKLQHPLGVTFNDTNNKLYVADTYNHKIKIIDIDSNDISTL 520
            .||||:|:|||||||||:||:...|||||||||::::..:.|||||:||||||::|..:.....|
Zfish   438 HVVGGERDPLNLFAFGDVDGKGIDAKLQHPLGVSWDEGRSLLYVADSYNHKIKVVDPKTKQCMVL 502

  Fly   521 QIKSQENTNL-------ILNEPAGLCLDASGRNLLVADTNNHSIHTIDLVTLIAQPFGLDFRQIA 578
            ....:....:       ..|||.|||:...|:.|.|||||||.|..:||.|.....|     .|.
Zfish   503 AGTGKAGNGIGPSFLESSFNEPGGLCVGEGGKLLYVADTNNHHIKVLDLETKTVSLF-----PIV 562

  Fly   579 SASEIDAPQDTQKPTENN---------IVKALPLDLIKPS---------KIFFNLRLSPRFNFTK 625
            ...::||   ..|.|.||         :.|:.|: |..||         .:...|.|......|:
Zfish   563 GHQDVDA---ILKTTTNNTSAVKKRPKLPKSAPV-LAMPSISISSGQSVTLLLKLALPAGTKLTE 623

  Fly   626 EAPQKWIVKTVCQSVIVNPTCGN--LLDG----------------MCHMQVQATRPDFMCESSQI 672
            |||..|.:...          ||  ||:|                :..:.|....||      ..
Zfish   624 EAPSFWSLSAE----------GNEWLLEGRAVTGSIDDLSEPISIVLSIPVAPVSPD------PT 672

  Fly   673 FTIEFVLNLCLS--NCCLVKKITVSIKR 698
            .|::..|..|:|  ..|::|  |||.|:
Zfish   673 LTLDAWLYFCVSEGGACMMK--TVSFKQ 698

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12547NP_001036460.1 TlpA_like_DipZ_like 58..184 CDD:239310 68/127 (54%)
NHL <205..306 CDD:302697 44/101 (44%)
NHL repeat 227..271 CDD:271320 22/44 (50%)
NHL-2_like 262..618 CDD:271321 162/384 (42%)
NHL repeat 280..306 CDD:271320 11/25 (44%)
NHL repeat 282..324 CDD:271321 21/41 (51%)
NHL repeat 340..407 CDD:271321 19/66 (29%)
NHL repeat 424..470 CDD:271321 30/49 (61%)
NHL repeat 482..523 CDD:271321 20/40 (50%)
NHL repeat 534..569 CDD:271321 18/34 (53%)
nhlrc2XP_009305038.3 PRK11587 <26..716 CDD:331004 294/722 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574449
Domainoid 1 1.000 132 1.000 Domainoid score I5082
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 483 1.000 Inparanoid score I1410
OMA 1 1.010 - - QHG49747
OrthoDB 1 1.010 - - D1145834at2759
OrthoFinder 1 1.000 - - FOG0006210
OrthoInspector 1 1.000 - - oto39920
orthoMCL 1 0.900 - - OOG6_104506
Panther 1 1.100 - - LDO PTHR46388
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4487
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1312.910

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