DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL38 and rpl38

DIOPT Version :10

Sequence 1:NP_001036440.1 Gene:RpL38 / 3355144 FlyBaseID:FBgn0040007 Length:70 Species:Drosophila melanogaster
Sequence 2:NP_001005094.1 Gene:rpl38 / 448672 XenbaseID:XB-GENE-967893 Length:70 Species:Xenopus tropicalis


Alignment Length:70 Identity:50/70 - (71%)
Similarity:62/70 - (88%) Gaps:0/70 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPREIKEVKDFLNKARRSDARAVKIKKNPTNTKFKIRCSRFLYTLVVQDKEKADKIKQSLPPGLQ 65
            |||:|:|:||||..|||.||::||||||..|.|||:|||::|||||:.|||||:|:||||||||.
 Frog     1 MPRKIEEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSKYLYTLVITDKEKAEKLKQSLPPGLS 65

  Fly    66 VKEVK 70
            |||:|
 Frog    66 VKELK 70

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL38NP_001036440.1 Ribosomal_L38e 2..68 CDD:460326 46/65 (71%)
rpl38NP_001005094.1 Ribosomal_L38e 2..68 CDD:460326 46/65 (71%)

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