DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL38 and rpl-38

DIOPT Version :9

Sequence 1:NP_001036440.1 Gene:RpL38 / 3355144 FlyBaseID:FBgn0040007 Length:70 Species:Drosophila melanogaster
Sequence 2:NP_506860.1 Gene:rpl-38 / 180044 WormBaseID:WBGene00004452 Length:70 Species:Caenorhabditis elegans


Alignment Length:70 Identity:52/70 - (74%)
Similarity:64/70 - (91%) Gaps:0/70 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPREIKEVKDFLNKARRSDARAVKIKKNPTNTKFKIRCSRFLYTLVVQDKEKADKIKQSLPPGLQ 65
            ||:||||:||||.||||.||::||||||..|||||:||:.:||||||.||:||:|:|||||||:|
 Worm     1 MPKEIKEIKDFLVKARRKDAKSVKIKKNSNNTKFKVRCASYLYTLVVADKDKAEKLKQSLPPGIQ 65

  Fly    66 VKEVK 70
            |||:|
 Worm    66 VKELK 70

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL38NP_001036440.1 Ribosomal_L38e 2..68 CDD:396375 48/65 (74%)
rpl-38NP_506860.1 Ribosomal_L38e 2..68 CDD:280033 48/65 (74%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162250
Domainoid 1 1.000 110 1.000 Domainoid score I3971
eggNOG 1 0.900 - - E1_KOG3499
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H87098
Inparanoid 1 1.050 114 1.000 Inparanoid score I3415
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53929
OrthoDB 1 1.010 - - D1619070at2759
OrthoFinder 1 1.000 - - FOG0001834
OrthoInspector 1 1.000 - - oto17948
orthoMCL 1 0.900 - - OOG6_101624
Panther 1 1.100 - - LDO PTHR10965
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1134
SonicParanoid 1 1.000 - - X1359
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1615.840

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