DRSC/TRiP Functional Genomics Resources

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Protein Alignment p120ctn and VAC8

DIOPT Version :9

Sequence 1:NP_001036444.1 Gene:p120ctn / 3355143 FlyBaseID:FBgn0260799 Length:781 Species:Drosophila melanogaster
Sequence 2:NP_010903.3 Gene:VAC8 / 856702 SGDID:S000000739 Length:578 Species:Saccharomyces cerevisiae


Alignment Length:660 Identity:133/660 - (20%)
Similarity:233/660 - (35%) Gaps:230/660 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 LEEKD--DYIEGSENDICSTMRWRDPNLS--------------------------EVISFLSNPS 238
            ||:||  |:..|......:|:.:.| ||:                          .::..|.:..
Yeast    35 LEDKDQLDFYSGGPLKALTTLVYSD-NLNLQRSAALAFAEITEKYVRQVSREVLEPILILLQSQD 98

  Fly   239 SAIKANAAAYLQHLCYMDDPNKQRTRSLGGIPPLVRLLSYDSPEIHKNACGALRNLSYGRQNDEN 303
            ..|:..|.|.|.:|. :::.||.....:||:.||:..:..|:.|:..||.|.:.||:   ..|:|
Yeast    99 PQIQVAACAALGNLA-VNNENKLLIVEMGGLEPLINQMMGDNVEVQCNAVGCITNLA---TRDDN 159

  Fly   304 KRGIKNAGGIAALVHLLCRSQETEVKELVTGVLWNMSSCEDLKRSIIDEALVAVVCSVIKPHSGW 368
            |..|..:|.:..|.. |.:|:...|:...||.|.||:..|:.::.:::...|.|:.|::      
Yeast   160 KHKIATSGALIPLTK-LAKSKHIRVQRNATGALLNMTHSEENRKELVNAGAVPVLVSLL------ 217

  Fly   369 DAVCCGETCFSTVFRNASGVLRNVSSAGEHARGCLRNCEHLVECLLYVVRTSIEKNNIGNKTVEN 433
                                    ||.....:              |.                 
Yeast   218 ------------------------SSTDPDVQ--------------YY----------------- 227

  Fly   434 CVCILRNLSYRCQEVDDPNYDK----HPFITPERVIPSSSKGENLGCFGTNKKKKEANNSDALNE 494
            |...|.|::     ||:.|..|    .|.:..:.|....|....:.|..|            |..
Yeast   228 CTTALSNIA-----VDEANRKKLAQTEPRLVSKLVSLMDSPSSRVKCQAT------------LAL 275

  Fly   495 YNISADYSKSSVTYNKLNKGYEQLWQPEVVQ-----YYLSLLQSCSNPETLEAAAGAIQNLSACY 554
            .|:::|.|                :|.|:|:     :.:.|:||.|.|..| |:...|:|:|...
Yeast   276 RNLASDTS----------------YQLEIVRAGGLPHLVKLIQSDSIPLVL-ASVACIRNISIHP 323

  Fly   555 WQPSIDIRATVRKEKGLPILVELL-RMEVDRVVCAVATALRNLAI-DQRNKELIGKYAMRDLVQK 617
            ....:.:.|...|.     ||.|| ..:.:.:.|...:.|||||. .::|::           :.
Yeast   324 LNEGLIVDAGFLKP-----LVRLLDYKDSEEIQCHAVSTLRNLAASSEKNRK-----------EF 372

  Fly   618 LPSGNVQHDQNTSDDTITAVLATINE--VIKKNPEFSR-SLLDSGGIDRLM-------------- 665
            ..||.|:..:..:.|:..:|.:.|:.  .|....:.|: .||::..:|.|:              
Yeast   373 FESGAVEKCKELALDSPVSVQSEISACFAILALADVSKLDLLEANILDALIPMTFSQNQEVSGNA 437

  Fly   666 -----NITKRKEKYTSCV-----------------LK-----FASQVLYTMWQ----HNE-LRDV 698
                 |:..|...||..:                 ||     |....|:|:.|    ||: :.|:
Yeast   438 AAALANLCSRVNNYTKIIEAWDRPNEGIRGFLIRFLKSDYATFEHIALWTILQLLESHNDKVEDL 502

  Fly   699 YKK-----NGWKEQDFVS-----------KHFTAHNTPPSSPNNVNNTLNRPMASQGRTRYEDRT 747
            .|.     ||.::...|:           |:..::|.|.|:.||.||         ..|..|.:.
Yeast   503 VKNDDDIINGVRKMADVTFERLQRSGIDVKNPGSNNNPSSNDNNSNN---------NDTGSEHQP 558

  Fly   748 IQRGTSTLYS 757
            ::..:..||:
Yeast   559 VEDASLELYN 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p120ctnNP_001036444.1 ARM 227..341 CDD:237987 34/139 (24%)
armadillo repeat 227..252 CDD:293788 6/50 (12%)
armadillo repeat 260..296 CDD:293788 12/35 (34%)
armadillo repeat 304..339 CDD:293788 10/34 (29%)
ARM 307..442 CDD:237987 21/134 (16%)
armadillo repeat 347..392 CDD:293788 3/44 (7%)
armadillo repeat 515..556 CDD:293788 13/45 (29%)
ARM 516..643 CDD:237987 32/133 (24%)
armadillo repeat 562..596 CDD:293788 9/34 (26%)
armadillo repeat 601..641 CDD:293788 6/39 (15%)
VAC8NP_010903.3 SRP1 42..>358 CDD:227396 82/421 (19%)
armadillo repeat 119..155 CDD:293788 12/38 (32%)
armadillo repeat 160..194 CDD:293788 10/34 (29%)
armadillo repeat 204..235 CDD:293788 8/91 (9%)
armadillo repeat 242..280 CDD:293788 8/49 (16%)
armadillo repeat 286..319 CDD:293788 10/33 (30%)
armadillo repeat 326..361 CDD:293788 9/39 (23%)
armadillo repeat 369..402 CDD:293788 6/43 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 96 1.000 Inparanoid score I1485
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - oto99674
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2332
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.990

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