DRSC/TRiP Functional Genomics Resources

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Protein Alignment p120ctn and Pkp2

DIOPT Version :9

Sequence 1:NP_001036444.1 Gene:p120ctn / 3355143 FlyBaseID:FBgn0260799 Length:781 Species:Drosophila melanogaster
Sequence 2:NP_080439.1 Gene:Pkp2 / 67451 MGIID:1914701 Length:795 Species:Mus musculus


Alignment Length:487 Identity:161/487 - (33%)
Similarity:258/487 - (52%) Gaps:39/487 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   237 PSSAIKANAAAYLQHLCYMDDPNKQRTRSLGGIPPLVRLLSYDSPEIHKNACGALRNLSYGRQND 301
            |.|.|.| ||.::||..:.....::|...|.|||.|::||...:.::.:.||||||||.:  :::
Mouse   324 PVSKISA-AATFIQHESFQKSEARKRVNQLRGIPKLLQLLKLQNEDVQRAACGALRNLVF--EDN 385

  Fly   302 ENKRGIKNAGGIAALVHLLCRSQETEVKELVTGVLWNMSSCEDLKRSIIDEALVAVVCSVIKPHS 366
            :||..:....|:..|:.:|.::::.|.|:.:||:|||:||.:.||..:|.|||:.:..|||.|.|
Mouse   386 DNKLEVAELNGVPRLLQVLKQTRDLETKKQITGLLWNLSSSDKLKHLMITEALLTLTESVIIPFS 450

  Fly   367 GW---DAVCCGETCFSTVFRNASGVLRNVSSAGEHARGCLRNCEHLVECLLYVVRTSIEKNNIGN 428
            ||   |...........:|.|.:|.|||:||||...|..:|.|:.|::.|::.||.:|......:
Mouse   451 GWPEGDYPKANGLLDFDIFYNVTGCLRNMSSAGPDGRKMMRRCDGLIDSLVHYVRGTIADYQPDD 515

  Fly   429 KTVENCVCILRNLSYRCQEVDDPNYDKHPFITPERVIPSSSKGENLGCFGTNKKKKEANNSDALN 493
            |..|||||||.||||:.:......|.:..::....:..:|:|  ::||||:..:|          
Mouse   516 KATENCVCILHNLSYQLEAELPEKYSQSIYMQNRNIQTNSNK--SIGCFGSRSRK---------- 568

  Fly   494 EYNISADYSKSSVTYNKLN-KGYEQLWQPEVVQYYLSLLQSCSNPETLEAAAGAIQNLSACYWQ- 556
               :...|....:...:.| .|.|.||...|::.||||:...:...|.||:.||:|||:|.... 
Mouse   569 ---LKEQYQDLQMPEERSNPHGIEWLWHSIVIRMYLSLIAKSTRNYTQEASLGALQNLTAGGGPI 630

  Fly   557 PSIDIRATVRKEKGLPILVELLRMEVDRVVCAVATALRNLAIDQRNKEL---IGKYAMRDLVQKL 618
            |::..|..|:||.||....::|.:....|.....:.||||:   ||..|   |.|..:.|||..:
Mouse   631 PTLVARMVVQKENGLQHTRKMLHVGDPSVKKTAVSLLRNLS---RNLSLQNEIAKETLPDLVSII 692

  Fly   619 PSGNVQHDQNTSDD----TITAVLATINEVIKKNPEFSRSLLDSGGIDRLMNITKRKEKYTSCVL 679
            |      |...|.|    |..:...|:|.:::.:.:.:|.||::||:.::|.|:..:....:...
Mouse   693 P------DTVPSTDLLIETTASACYTLNNLMQNSYQNARDLLNTGGLQKIMTISIGEGYAPNKAS 751

  Fly   680 KFASQVLYTMWQHNELRDVYKKNGWKEQDFVS 711
            |.||.:||::|.|.||...|||..:|:.|||:
Mouse   752 KAASVLLYSLWAHTELHHAYKKAQFKKTDFVN 783

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p120ctnNP_001036444.1 ARM 227..341 CDD:237987 36/103 (35%)
armadillo repeat 227..252 CDD:293788 7/14 (50%)
armadillo repeat 260..296 CDD:293788 16/35 (46%)
armadillo repeat 304..339 CDD:293788 10/34 (29%)
ARM 307..442 CDD:237987 53/137 (39%)
armadillo repeat 347..392 CDD:293788 17/47 (36%)
armadillo repeat 515..556 CDD:293788 17/40 (43%)
ARM 516..643 CDD:237987 44/134 (33%)
armadillo repeat 562..596 CDD:293788 10/33 (30%)
armadillo repeat 601..641 CDD:293788 13/46 (28%)
Pkp2NP_080439.1 ARM 308..425 CDD:237987 36/103 (35%)
armadillo repeat 311..338 CDD:293788 7/14 (50%)
armadillo repeat 346..382 CDD:293788 16/35 (46%)
armadillo repeat 388..423 CDD:293788 10/34 (29%)
armadillo repeat 435..479 CDD:293788 16/43 (37%)
ARM 589..718 CDD:237987 45/137 (33%)
armadillo repeat 636..670 CDD:293788 10/33 (30%)
armadillo repeat 678..718 CDD:293788 12/45 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839539
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1048
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10372
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
65.800

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