DRSC/TRiP Functional Genomics Resources

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Protein Alignment p120ctn and arvcfb

DIOPT Version :9

Sequence 1:NP_001036444.1 Gene:p120ctn / 3355143 FlyBaseID:FBgn0260799 Length:781 Species:Drosophila melanogaster
Sequence 2:XP_009299795.1 Gene:arvcfb / 564669 ZFINID:ZDB-GENE-060526-60 Length:1048 Species:Danio rerio


Alignment Length:861 Identity:313/861 - (36%)
Similarity:425/861 - (49%) Gaps:210/861 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 SFQNYDQFSAAGYSSTP----LYITKPTGVGAITKVAPHCSQNKIETNSTDNSIPD--------I 91
            |:.||..    .|:.||    .:.|...|.|                     .:||        :
Zfish   232 SYNNYSD----SYNDTPDTQFRHYTLHDGYG---------------------DMPDNYGSLSRGV 271

  Fly    92 ENHPLATTVRYVQAGQYEDTSEYGVAGLTCGI---DSEYTAEAVVPY-CYTSDANYT-------- 144
            ...|...   |:..|.|...:.|     |..|   |..:.|:..||. ..|.|.|.:        
Zfish   272 NYRPYRP---YMPTGGYRPENSY-----TLPIRKDDYGHVAQPQVPMGSSTVDLNRSQPERFQPE 328

  Fly   145 --GIQNTTSSIKPFSGRPFNDNINGAEAVADSQCRTFKSSAEFKLPQFAMSSINTVPQR------ 201
              |:::...|:.|....|::..                       |.::.::..|:|.|      
Zfish   329 PYGLEDDRRSLGPEDEEPYDLE-----------------------PDYSTANRRTLPGRTIREPL 370

  Fly   202 -----------------LEEKDDYIEG--------------------------SENDICSTMRWR 223
                             ::|:..||.|                          |.:.|....|||
Zfish   371 RNGPRVRGYEDPIEAELIDERHPYIHGMYPAPLAQPERGSMASLDRMGGRRSPSIDSIRKDPRWR 435

  Fly   224 DPNLSEVISFLSNPSSAIKANAAAYLQHLCYMDDPNKQRTRSLGGIPPLVRLLSYDSPEIHKNAC 288
            ||:|.|||:.|.:|...:|:|||||||||||.:|..|:..|.|.|||.||.||.:...|:|:.||
Zfish   436 DPDLPEVIAMLGHPIDPVKSNAAAYLQHLCYENDKIKKDVRQLKGIPVLVSLLDHPKAEVHRKAC 500

  Fly   289 GALRNLSYGRQNDENKRGIKNAGGIAALVHLLCRSQETEVKELVTGVLWNMSSCEDLKRSIIDEA 353
            |||||:|||:.:| ||..||:..||.||:.||.::.:.||:||:||.|||:||.|.||..||:..
Zfish   501 GALRNISYGKDHD-NKVAIKSCDGIPALIRLLRKTNDMEVRELITGTLWNLSSYEPLKMVIINHG 564

  Fly   354 LVAVVCSVIKPHSGW-----------DAVCCGETCFSTVFRNASGVLRNVSSAGEHARGCLRNCE 407
            |..:...||.|||||           ||.      ::|||:|.||.||||||.|..||..||.||
Zfish   565 LQTMTNEVIIPHSGWEHEPNEDSKPRDAE------WTTVFKNTSGCLRNVSSDGAEARRRLRECE 623

  Fly   408 HLVECLLYVVRTSIEKNNIGNKTVENCVCILRNLSYRCQEVDDPNYDKHPFITPERV-IPSSS-- 469
            .||:.||:.:::::.|.::.||:|||||||:|||||...: :.|..:|  |..|..: .|.|:  
Zfish   624 GLVDALLHALQSAVGKKDMDNKSVENCVCIMRNLSYHVHK-EVPGAEK--FQDPSALQAPGSAGT 685

  Fly   470 ---KGENLGCFGTNKKKKEANNSD---ALNEY--NISADYSKSSVTYNKLN--------KGYEQL 518
               |.::.||||..|.|:|..|..   .|.:|  ..:.::.|:   |:.|:        ||:|.|
Zfish   686 QRKKKDDAGCFGGKKAKEEWFNQAHQVCLEQYEGRKNGEHDKN---YDTLDLPKRTEPTKGFELL 747

  Fly   519 WQPEVVQYYLSLLQSCSNPETLEAAAGAIQNLSACYWQPSIDIRATVRKEKGLPILVELLRMEVD 583
            :|||||:.|||||....|..||||||||:|||||..|..|..|||||||||||||||||||.:.|
Zfish   748 YQPEVVRLYLSLLTESQNYNTLEAAAGALQNLSAGQWTWSNYIRATVRKEKGLPILVELLRSDSD 812

  Fly   584 RVVCAVATALRNLAIDQRNKELIGKYAMRDLVQKLPSGNVQHDQNTSDDTITAVLATINEVIKKN 648
            :||.|||.|||||:||:|||:|||.|||||||..||||..:..:|..:||:.|:|.||:|:|..:
Zfish   813 KVVRAVAIALRNLSIDRRNKDLIGSYAMRDLVSNLPSGQQRPAKNLEEDTVVAILNTIHEIITDS 877

  Fly   649 PEFSRSLLDSGGIDRL--MNITKRKEKYTSCVLKFASQVLYTMWQHNELRDVYKKNGWKEQDFVS 711
            .|.:|||:.:..||:|  :|.|.:..:.|    |.||.||.|:|.:.|||:...|:||.:     
Zfish   878 SENARSLITAQAIDKLVAINRTSQSARET----KAASHVLQTVWSYKELRNALTKDGWNK----- 933

  Fly   712 KHF--TAHNTPPSS----PNNVNNTL--------NR--------PMASQGRTRYEDRTI-QRGTS 753
            .||  .|..||..|    |...:.||        :|        ||...|...|.  || ||...
Zfish   934 THFQPIAAGTPKGSKSCKPGYDDTTLPLMEKSQGHRGCSGGDMIPMDELGPDGYS--TIDQRDKD 996

  Fly   754 TLYSANDSSGAVMSNE 769
            :.|.::|.|..:...|
Zfish   997 SKYKSSDISSDLQERE 1012

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p120ctnNP_001036444.1 ARM 227..341 CDD:237987 61/113 (54%)
armadillo repeat 227..252 CDD:293788 14/24 (58%)
armadillo repeat 260..296 CDD:293788 19/35 (54%)
armadillo repeat 304..339 CDD:293788 17/34 (50%)
ARM 307..442 CDD:237987 69/145 (48%)
armadillo repeat 347..392 CDD:293788 20/55 (36%)
armadillo repeat 515..556 CDD:293788 26/40 (65%)
ARM 516..643 CDD:237987 84/126 (67%)
armadillo repeat 562..596 CDD:293788 27/33 (82%)
armadillo repeat 601..641 CDD:293788 22/39 (56%)
arvcfbXP_009299795.1 ARM 434..552 CDD:237987 65/118 (55%)
armadillo repeat 439..464 CDD:293788 14/24 (58%)
armadillo repeat 472..508 CDD:293788 19/35 (54%)
armadillo repeat 515..550 CDD:293788 17/34 (50%)
armadillo repeat 557..608 CDD:293788 21/56 (38%)
ARM 745..849 CDD:237987 74/103 (72%)
armadillo repeat 745..781 CDD:293788 24/35 (69%)
HEAT_2 757..>825 CDD:290374 48/67 (72%)
armadillo repeat 791..825 CDD:293788 27/33 (82%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 117 1.000 Domainoid score I5860
eggNOG 1 0.900 - - E1_KOG1048
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 430 1.000 Inparanoid score I1698
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D125744at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm24726
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10372
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2332
SonicParanoid 1 1.000 - - X765
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
99.000

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