DRSC/TRiP Functional Genomics Resources

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Protein Alignment p120ctn and arvcfb

DIOPT Version :10

Sequence 1:NP_001036444.1 Gene:p120ctn / 3355143 FlyBaseID:FBgn0260799 Length:781 Species:Drosophila melanogaster
Sequence 2:XP_009299796.1 Gene:arvcfb / 564669 ZFINID:ZDB-GENE-060526-60 Length:1038 Species:Danio rerio


Alignment Length:856 Identity:312/856 - (36%)
Similarity:422/856 - (49%) Gaps:210/856 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 SFQNYDQFSAAGYSSTP----LYITKPTGVGAITKVAPHCSQNKIETNSTDNSIPD--------I 91
            |:.||..    .|:.||    .:.|...|.|                     .:||        :
Zfish   232 SYNNYSD----SYNDTPDTQFRHYTLHDGYG---------------------DMPDNYGSLSRGV 271

  Fly    92 ENHPLATTVRYVQAGQYEDTSEYGVAGLTCGI---DSEYTAEAVVPY-CYTSDANYT-------- 144
            ...|...   |:..|.|...:.|     |..|   |..:.|:..||. ..|.|.|.:        
Zfish   272 NYRPYRP---YMPTGGYRPENSY-----TLPIRKDDYGHVAQPQVPMGSSTVDLNRSQPERFQPE 328

  Fly   145 --GIQNTTSSIKPFSGRPFNDNINGAEAVADSQCRTFKSSAEFKLPQFAMSSINTVPQR------ 201
              |:::...|:.|....|::..                       |.::.::..|:|.|      
Zfish   329 PYGLEDDRRSLGPEDEEPYDLE-----------------------PDYSTANRRTLPGRTIREPL 370

  Fly   202 -----------------LEEKDDYIEG--------------------------SENDICSTMRWR 223
                             ::|:..||.|                          |.:.|....|||
Zfish   371 RNGPRVRGYEDPIEAELIDERHPYIHGMYPAPLAQPERGSMASLDRMGGRRSPSIDSIRKDPRWR 435

  Fly   224 DPNLSEVISFLSNPSSAIKANAAAYLQHLCYMDDPNKQRTRSLGGIPPLVRLLSYDSPEIHKNAC 288
            ||:|.|||:.|.:|...:|:|||||||||||.:|..|:..|.|.|||.||.||.:...|:|:.||
Zfish   436 DPDLPEVIAMLGHPIDPVKSNAAAYLQHLCYENDKIKKDVRQLKGIPVLVSLLDHPKAEVHRKAC 500

  Fly   289 GALRNLSYGRQNDENKRGIKNAGGIAALVHLLCRSQETEVKELVTGVLWNMSSCEDLKRSIIDEA 353
            |||||:|||:.:| ||..||:..||.||:.||.::.:.||:||:||.|||:||.|.||..||:..
Zfish   501 GALRNISYGKDHD-NKVAIKSCDGIPALIRLLRKTNDMEVRELITGTLWNLSSYEPLKMVIINHG 564

  Fly   354 LVAVVCSVIKPHSGW-----------DAVCCGETCFSTVFRNASGVLRNVSSAGEHARGCLRNCE 407
            |..:...||.|||||           ||.      ::|||:|.||.||||||.|..||..||.||
Zfish   565 LQTMTNEVIIPHSGWEHEPNEDSKPRDAE------WTTVFKNTSGCLRNVSSDGAEARRRLRECE 623

  Fly   408 HLVECLLYVVRTSIEKNNIGNKTVENCVCILRNLSYRCQEVDDPNYDKHPFITPERV-IPSSS-- 469
            .||:.||:.:::::.|.::.||:|||||||:|||||...: :.|..:|  |..|..: .|.|:  
Zfish   624 GLVDALLHALQSAVGKKDMDNKSVENCVCIMRNLSYHVHK-EVPGAEK--FQDPSALQAPGSAGT 685

  Fly   470 ---KGENLGCFGTNKKKKEANNSDALNEYNISADYSKSSVTYNKLN--------KGYEQLWQPEV 523
               |.::.||||..|.|:|..|....|     .::.|:   |:.|:        ||:|.|:||||
Zfish   686 QRKKKDDAGCFGGKKAKEEWFNQGRKN-----GEHDKN---YDTLDLPKRTEPTKGFELLYQPEV 742

  Fly   524 VQYYLSLLQSCSNPETLEAAAGAIQNLSACYWQPSIDIRATVRKEKGLPILVELLRMEVDRVVCA 588
            |:.|||||....|..||||||||:|||||..|..|..|||||||||||||||||||.:.|:||.|
Zfish   743 VRLYLSLLTESQNYNTLEAAAGALQNLSAGQWTWSNYIRATVRKEKGLPILVELLRSDSDKVVRA 807

  Fly   589 VATALRNLAIDQRNKELIGKYAMRDLVQKLPSGNVQHDQNTSDDTITAVLATINEVIKKNPEFSR 653
            ||.|||||:||:|||:|||.|||||||..||||..:..:|..:||:.|:|.||:|:|..:.|.:|
Zfish   808 VAIALRNLSIDRRNKDLIGSYAMRDLVSNLPSGQQRPAKNLEEDTVVAILNTIHEIITDSSENAR 872

  Fly   654 SLLDSGGIDRL--MNITKRKEKYTSCVLKFASQVLYTMWQHNELRDVYKKNGWKEQDFVSKHF-- 714
            ||:.:..||:|  :|.|.:..:.|    |.||.||.|:|.:.|||:...|:||.:     .||  
Zfish   873 SLITAQAIDKLVAINRTSQSARET----KAASHVLQTVWSYKELRNALTKDGWNK-----THFQP 928

  Fly   715 TAHNTPPSS----PNNVNNTL--------NR--------PMASQGRTRYEDRTI-QRGTSTLYSA 758
            .|..||..|    |...:.||        :|        ||...|...|.  || ||...:.|.:
Zfish   929 IAAGTPKGSKSCKPGYDDTTLPLMEKSQGHRGCSGGDMIPMDELGPDGYS--TIDQRDKDSKYKS 991

  Fly   759 NDSSGAVMSNE 769
            :|.|..:...|
Zfish   992 SDISSDLQERE 1002

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p120ctnNP_001036444.1 armadillo repeat 227..252 CDD:293788 14/24 (58%)
Arm 256..295 CDD:425727 20/38 (53%)
armadillo repeat 260..296 CDD:293788 19/35 (54%)
ARM 300..341 CDD:214547 20/40 (50%)
armadillo repeat 304..339 CDD:293788 17/34 (50%)
armadillo repeat 347..392 CDD:293788 20/55 (36%)
armadillo repeat 515..556 CDD:293788 26/40 (65%)
Arm 516..552 CDD:425727 24/35 (69%)
ARM 560..597 CDD:214547 29/36 (81%)
armadillo repeat 562..596 CDD:293788 27/33 (82%)
armadillo repeat 601..641 CDD:293788 22/39 (56%)
arvcfbXP_009299796.1 armadillo repeat 439..464 CDD:293788 14/24 (58%)
ARM 468..508 CDD:214547 20/39 (51%)
armadillo repeat 472..508 CDD:293788 19/35 (54%)
Arm 511..552 CDD:425727 20/41 (49%)
armadillo repeat 515..550 CDD:293788 17/34 (50%)
armadillo repeat 557..608 CDD:293788 21/56 (38%)
armadillo repeat 735..771 CDD:293788 24/35 (69%)
Arm 735..771 CDD:425727 24/35 (69%)
ARM 777..816 CDD:214547 30/38 (79%)
armadillo repeat 781..815 CDD:293788 27/33 (82%)

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