DRSC/TRiP Functional Genomics Resources

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Protein Alignment p120ctn and armc2

DIOPT Version :9

Sequence 1:NP_001036444.1 Gene:p120ctn / 3355143 FlyBaseID:FBgn0260799 Length:781 Species:Drosophila melanogaster
Sequence 2:XP_683582.4 Gene:armc2 / 555846 ZFINID:ZDB-GENE-041014-7 Length:812 Species:Danio rerio


Alignment Length:457 Identity:96/457 - (21%)
Similarity:158/457 - (34%) Gaps:153/457 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   266 LGGIPPLVRLLSYDSPEIHKNACGALRNLSYGRQNDENKRGIKNAGGIAALVHLLCRSQETEVKE 330
            |.|...|.|||      :.|...|.|..||        ||.:.:....:|.|:  ....:.|.::
Zfish   363 LSGNSALSRLL------LDKGFIGVLMQLS--------KRLMHSPSATSANVN--THRSDGEGQQ 411

  Fly   331 LVTG--------VLWNMSSCEDLKRSIIDEALVAVVCSVIKPHSGWDAVCCGETCFSTVFRNASG 387
            ::||        .|.|::...:.:.|.:.....:.:|.:::.|.....||.          |.:.
Zfish   412 IITGHILVQVTAALRNIADQSESRPSFLSNKAFSTLCLILENHRNDLDVCI----------NVAR 466

  Fly   388 VLRNVSSAGEHARGCLRNCEHLVE----CLLY-------------VVRTSIEKNNIGNKTV---- 431
            :...:|:..|    |   |..|.|    |.|:             |||......|:..|:.    
Zfish   467 IFSKLSTYTE----C---CHALAETPRCCSLFLELLGKHSRKQDLVVRLLFTLGNLTAKSTEARE 524

  Fly   432 -----ENCVCILRNLSYRCQEVDDPNYDKHPFITPER---------------VIPSSSKG----- 471
                 |..:.:|.:|....|....|...:   ::|||               :.|:....     
Zfish   525 QVYEEERGMDVLLDLFQAYQNTSSPPEQR---LSPEREDVLVKLIRLLANLAIHPTVGTALAANT 586

  Fly   472 -------ENLGCFGTNKKKKEANNSDA-LNEYNISADYSKSSVTYN----------KLNKGYEQ- 517
                   |.|.|....:.::...|:.| :|  |:|...|:|||..:          ||..|... 
Zfish   587 LCVQLLLEVLECRSVQESEELVINAVATIN--NLSFYPSQSSVIRSQHTHISQLLLKLLLGSSMD 649

  Fly   518 ---------------------LWQPEVVQYYLSLLQSCSNPETLEAAAGAIQNLSACYWQPSIDI 561
                                 :.|.:|.|:.::||.| .:|:...:|.|.:.||||   .|  |.
Zfish   650 AVLEATRVFGNLSQIKDVRRFVMQHKVEQFVITLLDS-KSPDVCFSACGVLINLSA---DP--DN 708

  Fly   562 RATVRKEKGLPILVELLR------MEVDRVVCAVATALRNLAID------QRNKELIGKYAMRDL 614
            ||.:..|..:..||:.||      ..:..|||   ..|.|.::|      |...|::..|..|:.
Zfish   709 RAMLSAEGAVQKLVDCLRDFGPQDWHLAAVVC---QTLWNCSLDGELQHAQELLEILRLYTDREA 770

  Fly   615 VQ 616
            :|
Zfish   771 LQ 772

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p120ctnNP_001036444.1 ARM 227..341 CDD:237987 20/82 (24%)
armadillo repeat 227..252 CDD:293788
armadillo repeat 260..296 CDD:293788 10/29 (34%)
armadillo repeat 304..339 CDD:293788 8/42 (19%)
ARM 307..442 CDD:237987 28/168 (17%)
armadillo repeat 347..392 CDD:293788 6/44 (14%)
armadillo repeat 515..556 CDD:293788 13/62 (21%)
ARM 516..643 CDD:237987 33/135 (24%)
armadillo repeat 562..596 CDD:293788 11/39 (28%)
armadillo repeat 601..641 CDD:293788 4/16 (25%)
armc2XP_683582.4 ARM 491..619 CDD:237987 21/132 (16%)
ARM 651..745 CDD:237987 26/102 (25%)
armadillo repeat 668..704 CDD:293788 11/36 (31%)
armadillo repeat 709..745 CDD:293788 11/38 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1048
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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