DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment p120ctn and ARVCF

DIOPT Version :9

Sequence 1:NP_001036444.1 Gene:p120ctn / 3355143 FlyBaseID:FBgn0260799 Length:781 Species:Drosophila melanogaster
Sequence 2:XP_006724306.1 Gene:ARVCF / 421 HGNCID:728 Length:1004 Species:Homo sapiens


Alignment Length:666 Identity:265/666 - (39%)
Similarity:372/666 - (55%) Gaps:81/666 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 TTSSIKPFSG-----RPFNDNINGAEAVADSQCRTFKSSAEFKLPQ-FAMSSINTVPQRLEEKDD 207
            |.:..:|..|     |.:.|..:....:||.:......:|....|: .:|.|::    ||..:..
Human   284 TATRRRPECGRGLHTRAYEDTADDGGELADERPAFPMVTAPLAQPERGSMGSLD----RLVRRSP 344

  Fly   208 YIEGSENDICSTMRWRDPNLSEVISFLSNPSSAIKANAAAYLQHLCYMDDPNKQRTRSLGGIPPL 272
            .::.:..:    .|||||.|.||::.|.:|...:||||||||||||:.::..|:|.|.|.|:|.|
Human   345 SVDSARKE----PRWRDPELPEVLAMLRHPVDPVKANAAAYLQHLCFENEGVKRRVRQLRGLPLL 405

  Fly   273 VRLLSYDSPEIHKNACGALRNLSYGRQNDENKRGIKNAGGIAALVHLLCRSQETEVKELVTGVLW 337
            |.||.:...|:.:.||||||||||||..| ||..|::.||:.|||.||..:::.||:|||||.||
Human   406 VALLDHPRAEVRRRACGALRNLSYGRDTD-NKAAIRDCGGVPALVRLLRAARDNEVRELVTGTLW 469

  Fly   338 NMSSCEDLKRSIIDEALVAVVCSVIKPHSGW-----------DAVCCGETCFSTVFRNASGVLRN 391
            |:||.|.||..|||..|..:...||.|||||           ||.      ::|||:|.||.|||
Human   470 NLSSYEPLKMVIIDHGLQTLTHEVIVPHSGWEREPNEDSKPRDAE------WTTVFKNTSGCLRN 528

  Fly   392 VSSAGEHARGCLRNCEHLVECLLYVVRTSIEKNNIGNKTVENCVCILRNLSYRCQEVDDPNYDKH 456
            |||.|..||..||.||.||:.||:.:::::.:.:..||:|||||||:|||||...: :.|..|::
Human   529 VSSDGAEARRRLRECEGLVDALLHALQSAVGRKDTDNKSVENCVCIMRNLSYHVHK-EVPGADRY 592

  Fly   457 PFITP----ERVIPSSSKGENLGCFGTNKKKKE---ANNSDALNEYNI-SADYSKSSVTYNKLNK 513
            ....|    ..|.....:.::..|||..|.|:|   ....|...:.|. :.|..|.:    :..|
Human   593 QEAEPGPLGSAVGSQRRRRDDASCFGGKKAKEEWFHQGKKDGEMDRNFDTLDLPKRT----EAAK 653

  Fly   514 GYEQLWQPEVVQYYLSLLQSCSNPETLEAAAGAIQNLSACYWQPSIDIRATVRKEKGLPILVELL 578
            |:|.|:|||||:.|||||....|..||||||||:|||||..|..:..||||||||:|||:|||||
Human   654 GFELLYQPEVVRLYLSLLTESRNFNTLEAAAGALQNLSAGNWMWATYIRATVRKERGLPVLVELL 718

  Fly   579 RMEVDRVVCAVATALRNLAIDQRNKELIGKYAMRDLVQKLPSGNVQHDQN-------TSDDTITA 636
            :.|.|:||.|||.|||||::|:|||:|||.|||.:||:     ||::.|.       ..:||:.|
Human   719 QSETDKVVRAVAIALRNLSLDRRNKDLIGSYAMAELVR-----NVRNAQAPPRPGACLEEDTVVA 778

  Fly   637 VLATINEVIKKNPEFSRSLLDSGGIDRLMNITKRKEKYTSCVLKFASQVLYTMWQHNELRDVYKK 701
            ||.||:|::..:.:.:||||.:.|:..|:.:....:.....  |.||.||.|:|.:.|||...:|
Human   779 VLNTIHEIVSDSLDNARSLLQARGVPALVALVASSQSVREA--KAASHVLQTVWSYKELRGTLQK 841

  Fly   702 NGWKEQDFVSKHFTAHNTPPS-SPNNVNN--------------TLNR---PMASQGRTRYE--DR 746
            :||.:..|.|...||.....: ||...::              |.:|   ||.:.|...|.  ||
Human   842 DGWTKARFQSAAATAKGPKGALSPGGFDDSTLPLVDKSLEGEKTGSRDVIPMDALGPDGYSTVDR 906

  Fly   747 TIQ--RGTSTLYSAND 760
            ..:  ||.|:...|::
Human   907 RERRPRGASSAGEASE 922

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p120ctnNP_001036444.1 ARM 227..341 CDD:237987 61/113 (54%)
armadillo repeat 227..252 CDD:293788 14/24 (58%)
armadillo repeat 260..296 CDD:293788 19/35 (54%)
armadillo repeat 304..339 CDD:293788 18/34 (53%)
ARM 307..442 CDD:237987 70/145 (48%)
armadillo repeat 347..392 CDD:293788 21/55 (38%)
armadillo repeat 515..556 CDD:293788 26/40 (65%)
ARM 516..643 CDD:237987 77/133 (58%)
armadillo repeat 562..596 CDD:293788 25/33 (76%)
armadillo repeat 601..641 CDD:293788 19/46 (41%)
ARVCFXP_006724306.1 ARM 355..473 CDD:237987 65/118 (55%)
HEAT_2 360..462 CDD:290374 53/102 (52%)
armadillo repeat 360..385 CDD:293788 14/24 (58%)
armadillo repeat 393..429 CDD:293788 19/35 (54%)
armadillo repeat 436..471 CDD:293788 18/34 (53%)
ARM 437..579 CDD:237987 70/147 (48%)
armadillo repeat 478..529 CDD:293788 22/56 (39%)
ARM 656..756 CDD:237987 66/99 (67%)
armadillo repeat 656..692 CDD:293788 24/35 (69%)
armadillo repeat 702..736 CDD:293788 25/33 (76%)
armadillo repeat 743..788 CDD:293788 20/49 (41%)
armadillo repeat 794..826 CDD:293788 9/33 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 109 1.000 Domainoid score I6339
eggNOG 1 0.900 - - E1_KOG1048
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 401 1.000 Inparanoid score I1931
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D125744at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm41407
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10372
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2332
SonicParanoid 1 1.000 - - X765
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
99.000

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