DRSC/TRiP Functional Genomics Resources

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Protein Alignment p120ctn and Pkp1

DIOPT Version :10

Sequence 1:NP_001036444.1 Gene:p120ctn / 3355143 FlyBaseID:FBgn0260799 Length:781 Species:Drosophila melanogaster
Sequence 2:NP_001381145.1 Gene:Pkp1 / 304822 RGDID:1307472 Length:728 Species:Rattus norvegicus


Alignment Length:694 Identity:187/694 - (26%)
Similarity:306/694 - (44%) Gaps:108/694 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 SLTHEPANMQ-SQFGSFQNYDQFSAAGYSSTPLYITKPTGVGAITKVAPHCSQNKIETNSTDNSI 88
            :|..||.|.: |.:...:|:.:....|..:|       ||.|     :..|...||:.:.::   
  Rat   108 TLKREPDNRRFSSYSQMENWSRHYPRGSCAT-------TGAG-----SDICFMQKIKASRSE--- 157

  Fly    89 PDIENHPLATTVRYVQAGQYEDTSE--YGVAGLTCGIDSEYTAEAVVPYCYTSDANYTGIQNTTS 151
            ||:...|..|..:....|:.:.|::  |.... ||      :.:..|..|.....:.|..|:.. 
  Rat   158 PDLYCDPRGTLRKGTLGGKGQKTTQNRYSFYS-TC------SGQKAVKKCPVRPPSCTSKQDPV- 214

  Fly   152 SIKPFSGRPFNDNINGAEAVADSQ-CRTFKSSAEFKLPQFAMSSINTVPQRLEEKDDYIEGSEND 215
            .:.|.|   .|.:::...:.|.|: |                                   ||:.
  Rat   215 CMPPIS---CNKDMSFGHSRASSKIC-----------------------------------SEDI 241

  Fly   216 ICSTMRWRDPNLSEVISFLSNPSSAIKANAAAYLQHLCYMDDPNKQRTRSLGGIPPLVRLLSYDS 280
            .||.:     .:.:.:.:|.:.....:|..|.|:||.|:.|:..||:...||||..||.||...:
  Rat   242 ECSGL-----TIPKAVQYLCSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPN 301

  Fly   281 PEIHKNACGALRNLSYGRQNDENKRGIKNAGGIAALVHLLCRSQETEVKELVTGVLWNMSSCEDL 345
            ..:.:.|.||||||.:  ::..||...:...||...|.||.||..||:::.:||:|||:||.::|
  Rat   302 QNVQQAAAGALRNLVF--RSTTNKLETRRQNGIREAVSLLRRSGSTEIQKQLTGLLWNLSSTDEL 364

  Fly   346 KRSIIDEALVAVVCSVIKPHSGWDAVCCGETCFS------TVFRNASGVLRNVSSAGEHARGCLR 404
            |..::.:||..:...||.|.|||   |.|.:..|      .||.||:|.|||:||| :..|..:|
  Rat   365 KEELVADALPVLTDRVIIPFSGW---CDGNSNMSREVVDPEVFFNATGCLRNLSSA-DAGRQTMR 425

  Fly   405 NCEHLVECLLYVVRTSIEKNNIGNKTVENCVCILRNLSYRCQEVDDPNYDKHPFITPERVIPSSS 469
            |...|::.|:..|:..:..:...:|:||||:|||.|||||........|.:..:.|.......||
  Rat   426 NYSGLIDSLMAYVQNCVAASRCDDKSVENCMCILHNLSYRLDAEVPTRYRQLEYNTRNAYTEKSS 490

  Fly   470 KGENLGCFGTNKKKKEANNSDA-LNEYNISADYSKSSVTYNKLNKGYEQLWQPEVVQYYLSLLQS 533
                .|||.....|...||.|. |.|...:.             ||...|:..:.::.||:|:..
  Rat   491 ----TGCFSNRGDKMMNNNYDCPLPEEETNP-------------KGSSWLYHSDAIRTYLNLMGK 538

  Fly   534 CSNPETLEAAAGAIQNLSACYWQPSIDIRATVR-KEKGLPILVELLRMEVDRVVCAVATALRNLA 597
            .....||||.|||:|||:|.....|..:...:. ||||||.:..||:.....||.:.|:.|.|::
  Rat   539 SKKDATLEACAGALQNLTASKGLMSNGMSQLIGIKEKGLPQIARLLQSGNSDVVRSGASLLSNMS 603

  Fly   598 IDQRNKELIGKYAMRDLVQKLPSGNVQHDQNT--SDDTITAVLATINEVIKKNPEFSRSLLDSGG 660
            .......::|.....::.:.|.|    |..||  |:|.:::...|:..::...|:.::....:..
  Rat   604 RHPVLHRVMGNQVFPEVTRLLTS----HTGNTSNSEDILSSACYTVRNLMTSQPQMAKQYFSNSM 664

  Fly   661 IDRLMNITKRKEKYTSCVLKFASQVLYTMWQHNELRDVYKKNGW 704
            ::.:.|:. |....:....:.|..:|..||...||:.|.::.|:
  Rat   665 LNNVFNLC-RNSASSPKAAEAARLLLSDMWASKELQSVLRQQGF 707

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p120ctnNP_001036444.1 armadillo repeat 227..252 CDD:293788 5/24 (21%)
Arm 256..295 CDD:425727 17/38 (45%)
armadillo repeat 260..296 CDD:293788 17/35 (49%)
ARM 300..341 CDD:214547 16/40 (40%)
armadillo repeat 304..339 CDD:293788 14/34 (41%)
armadillo repeat 347..392 CDD:293788 18/50 (36%)
armadillo repeat 515..556 CDD:293788 15/40 (38%)
Arm 516..552 CDD:425727 14/35 (40%)
ARM 560..597 CDD:214547 13/37 (35%)
armadillo repeat 562..596 CDD:293788 12/34 (35%)
armadillo repeat 601..641 CDD:293788 8/41 (20%)
Pkp1NP_001381145.1 armadillo repeat 240..273 CDD:293788 7/37 (19%)
ARM 277..317 CDD:214547 18/39 (46%)
armadillo repeat 281..317 CDD:293788 17/35 (49%)
ARM 319..360 CDD:214547 16/40 (40%)
armadillo repeat 323..358 CDD:293788 14/34 (41%)
armadillo repeat 365..416 CDD:293788 20/53 (38%)
Arm 516..557 CDD:425727 16/53 (30%)
armadillo repeat 569..604 CDD:293788 13/34 (38%)
ARM 572..604 CDD:214547 13/31 (42%)
armadillo repeat 610..648 CDD:293788 9/41 (22%)

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