DRSC/TRiP Functional Genomics Resources

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Protein Alignment p120ctn and jac-1

DIOPT Version :9

Sequence 1:NP_001036444.1 Gene:p120ctn / 3355143 FlyBaseID:FBgn0260799 Length:781 Species:Drosophila melanogaster
Sequence 2:NP_001294123.1 Gene:jac-1 / 178451 WormBaseID:WBGene00002175 Length:1256 Species:Caenorhabditis elegans


Alignment Length:591 Identity:253/591 - (42%)
Similarity:341/591 - (57%) Gaps:73/591 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 LEEKDDY---IEGSENDICSTMRWRDPNLSEVISFLSNPSSAIKANAAAYLQHLCYMDDPNKQRT 263
            |.|:||.   :..:.|::    :||||:|.|||.:||:.....:.||:.|||||.|.|:..|:.|
 Worm   669 LPERDDSPPPLRRANNNV----QWRDPSLKEVIEYLSSADKDKQLNASGYLQHLTYTDNQIKEET 729

  Fly   264 RSLGGIPPLVRLLSYDSPEIHKNACGALRNLSYGRQNDENKRGIKNAGGIAALVHLLCRSQETEV 328
            |..||||.|:.||..|:|.|.||||..|:|||:|::||.||..:..|.|:..:..:|..:.:..|
 Worm   730 REYGGIPKLIALLRSDTPRIQKNACACLKNLSFGKENDANKLAVMEADGVRLIAEVLRTTHDASV 794

  Fly   329 KELVTGVLWNMSSCEDLKRSIIDEALVAVVCSVIKP-----------HSGWDAVCCGETCFSTVF 382
            ||.....|||:||.:.||..|::.|...:...||.|           |.|           ||:|
 Worm   795 KEEAAAALWNLSSADMLKPVILESATEILSQQVIAPVLAVGTSDPTRHFG-----------STLF 848

  Fly   383 RNASGVLRNVSSAGEHARGCLRNCEHLVECLLYVVRTSIEKNNIGNKTVENCVCILRNLSYRCQE 447
            :|::|||||||:|.:.||..||:..:|:|.|::.:..:|:|:.:.:.||||.||:|||||||.||
 Worm   849 KNSTGVLRNVSAASQQARRRLRDIPNLIEALVHFLTHAIQKSQVDSPTVENAVCLLRNLSYRIQE 913

  Fly   448 VDDPNYDKHPFITPERVIPSSSKG-ENLGCFGTNKKKKEANNSDALNEYNISADYSKSSVTYNKL 511
            |.|||||      |.....||||. :::......||||:.......|..||        ||    
 Worm   914 VVDPNYD------PAAAHSSSSKNMKHVASPKPEKKKKDKEKKKDKNPKNI--------VT---- 960

  Fly   512 NKGYEQLWQPEVVQYYLSLLQSCSNPETLEAAAGAIQNLSACYWQPSIDIRATVRKEKGLPILVE 576
              |...||||.||:.||.|||..||.|||||:|||||||:||.:.||.::||.||.|||||:|||
 Worm   961 --GPSVLWQPHVVKLYLKLLQDSSNIETLEASAGAIQNLAACQFPPSAEVRAAVRVEKGLPVLVE 1023

  Fly   577 LLRMEVDRVVCAVATALRNLAIDQRNKELI--GKYAMRDLVQKLPSGNVQHDQNTSDDTITAVLA 639
            |:|:..|.|||||||||||||||.||:|||  ||||:||.:.|||..........||.||.|||.
 Worm  1024 LIRLPEDFVVCAVATALRNLAIDPRNRELIVSGKYALRDFLDKLPEPGSPRRSAISDQTIGAVLG 1088

  Fly   640 TINEVIKKNPEFSRSLLDSGGIDRLMNITKRKEKYTSCVLKFASQVLYTMWQHNELRDVYKKNGW 704
            .:.|:::.:..:::.:.:..|.|:|..:::....|:..|.|:||||||.||||.||.|.:|::|.
 Worm  1089 ILFEIVRSSAAYTKDVHELKGTDKLRALSRSYPTYSHRVCKYASQVLYVMWQHKELHDGFKRSGL 1153

  Fly   705 KEQDFVSKHFTAHNTPPSSPNNVNNTLNRPMASQGRTRYE----DRTIQRGTSTLYSANDSSGAV 765
            ||.||.|.  ||.....|       ||.||::||||.|..    |.|:        |:....|.:
 Worm  1154 KEADFYSG--TARRGDSS-------TLARPISSQGRERPSMHQLDETL--------SSGGGYGTM 1201

  Fly   766 MSNESA 771
            .||..|
 Worm  1202 ESNNRA 1207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p120ctnNP_001036444.1 ARM 227..341 CDD:237987 50/113 (44%)
armadillo repeat 227..252 CDD:293788 11/24 (46%)
armadillo repeat 260..296 CDD:293788 20/35 (57%)
armadillo repeat 304..339 CDD:293788 9/34 (26%)
ARM 307..442 CDD:237987 50/145 (34%)
armadillo repeat 347..392 CDD:293788 15/55 (27%)
armadillo repeat 515..556 CDD:293788 27/40 (68%)
ARM 516..643 CDD:237987 80/128 (63%)
armadillo repeat 562..596 CDD:293788 25/33 (76%)
armadillo repeat 601..641 CDD:293788 21/41 (51%)
jac-1NP_001294123.1 FN3 205..294 CDD:238020
FN3 313..403 CDD:238020
FN3 428..513 CDD:238020
FN3 528..619 CDD:238020
ARM 688..807 CDD:237987 54/118 (46%)
armadillo repeat 693..718 CDD:293788 11/24 (46%)
armadillo repeat 726..762 CDD:293788 20/35 (57%)
armadillo repeat 770..805 CDD:293788 9/34 (26%)
armadillo repeat 819..858 CDD:293788 14/49 (29%)
ARM 849..>918 CDD:237987 35/68 (51%)
armadillo repeat 876..907 CDD:293788 12/30 (40%)
armadillo repeat 911..999 CDD:293788 48/107 (45%)
ARM 964..1065 CDD:237987 70/100 (70%)
armadillo repeat 1009..1043 CDD:293788 25/33 (76%)
armadillo repeat 1051..1093 CDD:293788 19/41 (46%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166694
Domainoid 1 1.000 111 1.000 Domainoid score I3940
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006320
OrthoInspector 1 1.000 - - oto18139
orthoMCL 1 0.900 - - OOG6_104813
Panther 1 1.100 - - LDO PTHR10372
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2332
SonicParanoid 1 1.000 - - X765
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.870

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