DRSC/TRiP Functional Genomics Resources

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Protein Alignment p120ctn and hmp-2

DIOPT Version :9

Sequence 1:NP_001036444.1 Gene:p120ctn / 3355143 FlyBaseID:FBgn0260799 Length:781 Species:Drosophila melanogaster
Sequence 2:NP_001252425.1 Gene:hmp-2 / 173338 WormBaseID:WBGene00001979 Length:704 Species:Caenorhabditis elegans


Alignment Length:811 Identity:147/811 - (18%)
Similarity:262/811 - (32%) Gaps:310/811 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 LATTVRYVQAGQYEDTSEYGVAGLTCGIDSEYTAEAVVPYCYTSDANYTGIQNTTSSIKPFSGRP 160
            |.||:.......|...:::.|...|..|.|....:.:.|   ||.|..|   |:|:||......|
 Worm    23 LPTTMLLHSTNSYSIFTDHEVETRTSRIRSAMFPDWIPP---TSAAEAT---NSTTSIVEMMQMP 81

  Fly   161 FNDNINGAEAVADSQCRTFKSSAEFKLPQFAMSSINTVPQRLEEKDDYIEGSENDICSTMRWRDP 225
            ..                       :|.|..|..:.            .||| ||:...      
 Worm    82 TQ-----------------------QLKQSVMDLLT------------YEGS-NDMSGL------ 104

  Fly   226 NLSEVISFLSNPSSAIKANAAAYLQHLCYM---DDPNKQRT-----RSLGGIPPLVRLLSYDSPE 282
            :|.:::..:.:...::.|.|.    |..||   :|||....     ||.  :..|:......:..
 Worm   105 SLPDLVKLMCDHDESVVARAV----HRAYMLSREDPNFFNAPGFDHRSF--VEALMAASKSSNVN 163

  Fly   283 IHKNACGALRNLSYGRQNDENKRG---IKNAGGIAALVHLLCRSQETEVKELVT---GVLWNMSS 341
            :.:||.|||.::|      |.:.|   |..:||:|.::.:|..|.|:.|...||   .:|.::|.
 Worm   164 VRRNAIGALSHMS------EQRGGPLLIFRSGGLAEIIRMLYDSLESVVHYAVTTLRNLLMHVSD 222

  Fly   342 CEDLKRS-----------------------------IIDEA--------LVA--VVCSVIKPHSG 367
            .....|:                             :||:|        |:.  ::.|:::.:|.
 Worm   223 SRAQARALNAVEALTPHLHKTNPKLLAQVADGLYFLLIDDAPSKITFLSLLGPQILVSILREYSD 287

  Fly   368 -----WDAVCC------------------------GETCFSTVFRNASGVL---RNVSSAGEHAR 400
                 :..|.|                        .|.|.:...|:.:.:|   ||:|.:..:. 
 Worm   288 HRKLIYTVVRCIRSLSVCPSNKPALISLGCLPALYVELCTAKDERSQTAILVAMRNLSDSATNE- 351

  Fly   401 GCLRNCEHLVECLLYVVRTSIEKNNIGNKTVENCVCILRNLSYRCQEVDDPNYDKHPFITPERVI 465
               .|...|:..||.::|       :.|..:..|.|  ..||                       
 Worm   352 ---ENLTQLIIKLLEIIR-------VANDGMTACAC--GTLS----------------------- 381

  Fly   466 PSSSKGENLGCFGTNKKKKEANNS--DALNEYNISADYSKSSVTYNKLNKGYEQLWQP------- 521
                   ||.|..|..|:...::.  |||             ||..:.....|::.:|       
 Worm   382 -------NLTCNNTRNKQTVCSHGGIDAL-------------VTAIRRLPEVEEVTEPALCALRH 426

  Fly   522 ------------------EVVQYYLSLLQSCSNPETLEAAAGAIQNLSACYWQPSIDI--RATVR 566
                              :.....|..|::...| .::||.|.|:| ||......|::  ..|..
 Worm   427 CTARHSLAEEAQSELRFCQAFPVILDQLETLRTP-VIKAALGVIRN-SALLQTNLIELTQEQTAN 489

  Fly   567 KEKGLPILVELLRMEVDR----------------VVCAVATALRNLAIDQRNKELIGKYAMRDLV 615
            ....:.:.:::||..:..                |:....:||..||    |...:......|:.
 Worm   490 GHTAVSLTMDILRRAITAIEENPDIAVDGVPMWGVIEGAVSALHQLA----NHPAVAAACCDDIG 550

  Fly   616 QKLPSGN-------------VQHDQ--NTSDDTITAVLATINEVIKKNPEFSRSLLDSGGIDRLM 665
            |   .||             :.|.:  :..|:.:...:..:...:.|.|:.:|: ::|.|:..|:
 Worm   551 Q---VGNPECPPFLDLLHRLLAHPRLGSMDDEVLEREILGLLYQLSKRPDGARA-VESTGVSALL 611

  Fly   666 NITKRKEKYTSCVLKFASQVL-------------------YTM------WQHNELRDVYKKNGWK 705
             :..|..:|.| |:.:|:.||                   |.|      ||.:.|          
 Worm   612 -MESRGSQYKS-VVTYANGVLSNLKRGDSAAIMNMSNSYDYEMSGSAADWQRDGL---------- 664

  Fly   706 EQDFVSKHFTAHNTPPSSPNN--VNNTLNRP 734
            |::..::.:..::...|...|  :||:..||
 Worm   665 ERELFAEMYPTNDGGHSESINMALNNSQMRP 695

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p120ctnNP_001036444.1 ARM 227..341 CDD:237987 31/127 (24%)
armadillo repeat 227..252 CDD:293788 3/24 (13%)
armadillo repeat 260..296 CDD:293788 8/40 (20%)
armadillo repeat 304..339 CDD:293788 12/40 (30%)
ARM 307..442 CDD:237987 36/208 (17%)
armadillo repeat 347..392 CDD:293788 14/115 (12%)
armadillo repeat 515..556 CDD:293788 12/65 (18%)
ARM 516..643 CDD:237987 28/184 (15%)
armadillo repeat 562..596 CDD:293788 6/49 (12%)
armadillo repeat 601..641 CDD:293788 7/54 (13%)
hmp-2NP_001252425.1 ARM 106..216 CDD:237987 30/121 (25%)
HEAT_2 106..>185 CDD:290374 20/90 (22%)
HEAT repeat 106..137 CDD:293787 7/34 (21%)
HEAT repeat 149..177 CDD:293787 7/35 (20%)
ARM 183..303 CDD:237987 21/119 (18%)
armadillo repeat 185..216 CDD:293788 10/30 (33%)
armadillo repeat 224..260 CDD:293788 1/35 (3%)
armadillo repeat 275..302 CDD:293788 4/26 (15%)
Arm 305..346 CDD:278915 6/40 (15%)
armadillo repeat 309..349 CDD:293788 7/39 (18%)
ARM 357..473 CDD:237987 29/169 (17%)
armadillo repeat 358..383 CDD:293788 8/63 (13%)
armadillo repeat 391..429 CDD:293788 8/50 (16%)
armadillo repeat 438..471 CDD:293788 7/33 (21%)
ARM 518..633 CDD:237987 25/124 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2332
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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