DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment p120ctn and PKP3

DIOPT Version :9

Sequence 1:NP_001036444.1 Gene:p120ctn / 3355143 FlyBaseID:FBgn0260799 Length:781 Species:Drosophila melanogaster
Sequence 2:NP_001289958.1 Gene:PKP3 / 11187 HGNCID:9025 Length:812 Species:Homo sapiens


Alignment Length:747 Identity:200/747 - (26%)
Similarity:336/747 - (44%) Gaps:176/747 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 FSAAGYSSTPLYITKPTGVGAITKVAPHCSQNKIETNSTDNSIPDIENHPLATTVRYVQAGQYED 110
            |.||||..     .:||                          |.:...|    |.:.:.|....
Human   158 FGAAGYGG-----AQPT--------------------------PPMPTRP----VSFHERGGVGS 187

  Fly   111 TSEYGVAGLTC------GIDSEYT--AEAVVPYCYTSDANYTGIQNTTSSIKPFSGRPFNDNING 167
            .::|....|..      |:|..|:  :|.:.| ..||.......:...||....:|     .::.
Human   188 RADYDTLSLRSLRLGPGGLDDRYSLVSEQLEP-AATSTYRAFAYERQASSSSSRAG-----GLDW 246

  Fly   168 AEAVADSQCRTFKSSAEFKLPQFAMS----------------------SINTVP----------- 199
            .||...|..||.::.|...|.:|..|                      |:.::.           
Human   247 PEATEVSPSRTIRAPAVRTLQRFQSSHRSRGVGGAVPGAVLEPVARAPSVRSLSLSLADSGHLPD 311

  Fly   200 -------------QRLEEKDDYIEGSENDICSTMRW---RDPNLSEVISFLSNPSSAIKANAAAY 248
                         |||....|.|     |:.|.:::   .||||..:              .|||
Human   312 VHGFNSYGSHRTLQRLSSGFDDI-----DLPSAVKYLMASDPNLQVL--------------GAAY 357

  Fly   249 LQHLCYMDDPNKQRTRSLGGIPPLVRLLSYDSPEIHKNACGALRNLSYGRQNDENKRGIKNAGGI 313
            :||.||.|...|::.|||..:|.||:|.::.:.|:.::|.||:|||.|  .|.:||..:....||
Human   358 IQHKCYSDAAAKKQARSLQAVPRLVKLFNHANQEVQRHATGAMRNLIY--DNADNKLALVEENGI 420

  Fly   314 AALVHLLCRSQETEVKELVTGVLWNMSSCEDLKRSIIDEALVAVVCSVIKPHSGWDAVCCG---- 374
            ..|:..| |.|:.|:::.|||:|||:||.:.||..:..:.|..:...|:.|.||     .|    
Human   421 FELLRTL-REQDDELRKNVTGILWNLSSSDHLKDRLARDTLEQLTDLVLSPLSG-----AGGPPL 479

  Fly   375 ---ETCFSTVFRNASGVLRNVSSAGEHARGCLRNCEHLVECLLYVVRTSIEKNNIGNKTVENCVC 436
               ....:.:|.||:|.|||:|||.:..|..:|.|..||:.|:..:..:::.....:|:|||.||
Human   480 IQQNASEAEIFYNATGFLRNLSSASQATRQKMRECHGLVDALVTSINHALDAGKCEDKSVENAVC 544

  Fly   437 ILRNLSYRCQEVDDPNYDKHPFITPERV-------IPSSSKGENLGCFGTNKKKKEANNSDALNE 494
            :|||||||.       ||:.|....:|:       :..:..||.:|||....::        |.|
Human   545 VLRNLSYRL-------YDEMPPSALQRLEGRGRRDLAGAPPGEVVGCFTPQSRR--------LRE 594

  Fly   495 YNISADYSKSSVTYNKLN---KGYEQLWQPEVVQYYLSLLQSCS-NPETLEAAAGAIQNLSA--C 553
            ..::||    ::|:.:::   ||.|.||.|::|..|..|||.|. |..|.||||||:||::|  .
Human   595 LPLAAD----ALTFAEVSKDPKGLEWLWSPQIVGLYNRLLQRCELNRHTTEAAAGALQNITAGDR 655

  Fly   554 YWQPSIDIRATVRKEKGLPILVELLRMEVDRVVCAVATALRNLAIDQRNKELIGKYAMRDLVQKL 618
            .|...:. |..:.:|:.|..|::.:|......:.::...:|||:.:.|||:.:....:..|::||
Human   656 RWAGVLS-RLALEQERILNPLLDRVRTADHHQLRSLTGLIRNLSRNARNKDEMSTKVVSHLIEKL 719

  Fly   619 PSGNVQHDQNTSDDTITAVLATINEVIKKNPEFSRSLLDSGGIDRLMNITKRK-----EKYTSCV 678
            | |:| .:::...:.:..::|.:|.::..:|..:|.||...|:.:|:.|.|::     ||.:   
Human   720 P-GSV-GEKSPPAEVLVNIIAVLNNLVVASPIAARDLLYFDGLRKLIFIKKKRDSPDSEKSS--- 779

  Fly   679 LKFASQVLYTMWQHNELRDVYKKNGWKEQDFV 710
             :.||.:|..:||:|:|...::..|::::||:
Human   780 -RAASSLLANLWQYNKLHRDFRAKGYRKEDFL 810

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p120ctnNP_001036444.1 ARM 227..341 CDD:237987 41/113 (36%)
armadillo repeat 227..252 CDD:293788 5/24 (21%)
armadillo repeat 260..296 CDD:293788 15/35 (43%)
armadillo repeat 304..339 CDD:293788 13/34 (38%)
ARM 307..442 CDD:237987 48/141 (34%)
armadillo repeat 347..392 CDD:293788 12/51 (24%)
armadillo repeat 515..556 CDD:293788 21/43 (49%)
ARM 516..643 CDD:237987 40/129 (31%)
armadillo repeat 562..596 CDD:293788 6/33 (18%)
armadillo repeat 601..641 CDD:293788 10/39 (26%)
PKP3NP_001289958.1 ARM 336..447 CDD:237987 45/127 (35%)
armadillo repeat 336..361 CDD:293788 9/38 (24%)
armadillo repeat 369..405 CDD:293788 15/35 (43%)
armadillo repeat 411..445 CDD:293788 13/34 (38%)
ARM 412..550 CDD:237987 48/143 (34%)
armadillo repeat 464..500 CDD:293788 11/40 (28%)
armadillo repeat 508..549 CDD:293788 14/40 (35%)
ARM 639..744 CDD:237987 30/107 (28%)
armadillo repeat 663..697 CDD:293788 6/33 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165149482
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1048
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D125744at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10372
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
76.810

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