DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17883 and tbc1d20.1

DIOPT Version :9

Sequence 1:NP_001036448.1 Gene:CG17883 / 3355139 FlyBaseID:FBgn0040005 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001016881.1 Gene:tbc1d20.1 / 549635 XenbaseID:XB-GENE-963355 Length:387 Species:Xenopus tropicalis


Alignment Length:368 Identity:142/368 - (38%)
Similarity:212/368 - (57%) Gaps:39/368 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 KKRLEIEKLINKNIDKNISFDV--LVKLSLAPYGLVNDDFRRILWPQLAGVDINHLGQAPTLDKF 84
            :|..:|:|.::|...     ||  |.:::::..||:.|..|..:||:|..|.:..|..|...|..
 Frog    15 RKLGDIQKALSKEPP-----DVAALRRMAISEGGLLTDQIRCQVWPRLLNVSVEELPPAAGPDLR 74

  Fly    85 QCHPEYNQVVLDVNRSLKRFPPGIPYEQRIALQDQLTVLILRVIQKYPNLRYYQGYHDVAVTFLL 149
            ..:.:|.||:|||.|||:|||||:|..:|..||:||..:||:|:.:.|.|.|||||||:.|||||
 Frog    75 LGNKDYQQVLLDVRRSLRRFPPGMPLSEREDLQEQLIDIILQVLAQNPQLHYYQGYHDIVVTFLL 139

  Fly   150 VVGEEIAFAIMEQLSTTHFSECMQETMEATQRRLMFIWPIIKFENPELYQFLQNSTVGTLFSLPW 214
            |||..:|.|::::|||.|..:.|..||:.|:..|.::.|||:..||.|:.|:|.:.|||:|:|.|
 Frog   140 VVGSRLATALVDKLSTHHLRDFMDPTMDNTKHILNYLMPIIELVNPSLHDFMQRAEVGTIFALSW 204

  Fly   215 YLTWFGHSLTSYRTVVRLYDYFLASPIYTSIFVTAAILLYRSDEILKEDCDMASVHCLLSVIPED 279
            .:|||||.|:.:|.||||||:|||......|:..|.|:|:|.:|:|:.:|||||||.|||.||:|
 Frog   205 LITWFGHVLSDFRHVVRLYDFFLACHPLMPIYFAAVIVLHREEEVLECECDMASVHHLLSKIPQD 269

  Fly   280 LPFEDLLKTSSSLLNKYSLTLIE-----------------KDVEELICQER-----RKRKTDEAL 322
            ||:|.|:..:..|..::..:.:.                 ||.|....|:.     |:|..|.| 
 Frog   270 LPYEILISRAGDLFVQFPPSELSREAALQHQAQRTAASTFKDFELASTQQHPDTVLRRRLRDSA- 333

  Fly   323 IVKRRQPATSNRIPIITKWLPNILTAKPVILTTAISIVVGVCA 365
               .|.|.|..   ::||...|.|....|:   .:::.:|..|
 Frog   334 ---HRDPGTKG---VLTKPRTNRLMKLAVM---GLTVALGAAA 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17883NP_001036448.1 RabGAP-TBC 91..260 CDD:278964 86/168 (51%)
tbc1d20.1NP_001016881.1 RabGAP-TBC 47..250 CDD:366170 96/202 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 194 1.000 Domainoid score I3116
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H32574
Inparanoid 1 1.050 242 1.000 Inparanoid score I3240
OMA 1 1.010 - - QHG54480
OrthoDB 1 1.010 - - D1107565at2759
OrthoFinder 1 1.000 - - FOG0003660
OrthoInspector 1 1.000 - - otm49320
Panther 1 1.100 - - O PTHR20913
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R538
SonicParanoid 1 1.000 - - X2532
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1313.110

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