DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17883 and gyp10

DIOPT Version :9

Sequence 1:NP_001036448.1 Gene:CG17883 / 3355139 FlyBaseID:FBgn0040005 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_595501.1 Gene:gyp10 / 2541149 PomBaseID:SPBC651.03c Length:373 Species:Schizosaccharomyces pombe


Alignment Length:305 Identity:85/305 - (27%)
Similarity:143/305 - (46%) Gaps:42/305 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 KRLEIEKLINKNIDK----NISFDVLVKLSLAPYGLVNDDFRRILWPQLAGVDINHLGQAPTLDK 83
            |:.||::|  ||..|    |...:.|..:....:|.:....|:.:|..|.|:...|        :
pombe     2 KKKEIKQL--KNEIKIALLNSDVETLSHIGKEGHGFLMKSLRKSVWVSLCGLSCRH--------R 56

  Fly    84 FQC---------HPEYNQVVLDVNRSLKRFP--PGIPYEQRIALQDQLTVLILRVIQKYPNLRYY 137
            .:|         :.:.|||.||..||..::.  |.:..:.|    .|||.|:..|.:.||.|.||
pombe    57 MECLSRSTSQSSYADQNQVHLDSERSFFQYKLNPFLLRKHR----SQLTKLLSVVFKHYPELCYY 117

  Fly   138 QGYHDVAVTFLLVVGEEIAFAIMEQLSTTHFSECMQETMEATQRRLMFIWPIIKFENPELYQFLQ 202
            ||.||:|...||.:....|..:||.|......:.|..|::.|.::|..|..:||..:|.||::|.
pombe   118 QGLHDIAQILLLTLPFSHALPLMEHLVFYRLRDFMLPTLDGTVKQLQLILAVIKARDPTLYEYLI 182

  Fly   203 NSTVGTLFSLPWYLTWFGHSLTSYRTVVRLYDYFLASPIYTSIFVTAAILLYRSD---EILKEDC 264
            .:.:...|:|.|.:|||.|.::....|.||:|:|::|...|.::..|.::|....   |:|.::.
pombe   183 KADIQCYFALSWLITWFAHDVSDISVVCRLFDFFISSHPLTVVYTCAQVVLDNRTSIIELLWDNS 247

  Fly   265 DMASVHCLLSVIPEDLPFEDLLKTS---------SSL-LNKYSLT 299
            ....:|..|..:|..:....|:|.:         ||| |::|.::
pombe   248 GADLLHSYLCKLPASINVNQLIKNTCATISAVPFSSLPLDRYQIS 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17883NP_001036448.1 RabGAP-TBC 91..260 CDD:278964 58/173 (34%)
gyp10NP_595501.1 COG5210 1..373 CDD:227535 85/305 (28%)
RabGAP-TBC 72..240 CDD:278964 57/171 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 109 1.000 Domainoid score I1633
eggNOG 1 0.900 - - E1_KOG2595
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H32574
Inparanoid 1 1.050 120 1.000 Inparanoid score I1500
OMA 1 1.010 - - QHG54480
OrthoFinder 1 1.000 - - FOG0003660
OrthoInspector 1 1.000 - - oto101963
orthoMCL 1 0.900 - - OOG6_103152
Panther 1 1.100 - - LDO PTHR20913
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R538
SonicParanoid 1 1.000 - - X2532
TreeFam 1 0.960 - -
1413.860

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