Sequence 1: | NP_001036451.1 | Gene: | Nipped-B / 3355136 | FlyBaseID: | FBgn0026401 | Length: | 2077 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_010466.3 | Gene: | SCC2 / 851761 | SGDID: | S000002588 | Length: | 1493 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 1714 | Identity: | 346/1714 - (20%) |
---|---|---|---|
Similarity: | 617/1714 - (35%) | Gaps: | 453/1714 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 351 TSTSTSSSGKSQVRVCINRLSIEDSRLMQQSIKKFVQKSPELARSMGLLQETCQQQHENLNIIPT 415
Fly 416 SAEECVLESRASSTNNTVKIPIDTFSTIKADE---KRSAKRKL---AISIGDIPPEQIFSKPKMR 474
Fly 475 RVERITPLSNTKCVKEEVTRSQTYQQFIRNMDHIIEILDDSESPNFDSEDVDETIECISSKLLNS 539
Fly 540 MSTDVAKLKAKQALDSIPKNKLTLLINYAMRNVYLARNYFAGTEDEDEFVDDEVIEKLLNAMDAC 604
Fly 605 LLICNIYSTVSDLQFLQEDN-------VSHIIKFTQFQLRETIFPLHDPVYTAKSIKRTTHRKKI 662
Fly 663 KSHQAQNRSMQLFYLKTVELLKVFVTL--------FDKCVFVDTIVLPLSTLAIEPFFVDNI--- 716
Fly 717 -----------------ETLQF---------VCLELVTTIFRKERYDKIRNSILGDILTSIDRLP 755
Fly 756 SSK--KNLRPYKLTNNGGNIQMVTALVLQLIQCATILPDSLCDNGKFSNKPQEGNTFDEEGKKLL 818
Fly 819 QPSQDLLVLQKYDVAVSIGGNFLTTFLNKCKSRSNETDFRPLFENFIHDLLATVNKPEWPASE-L 882
Fly 883 LLSLLGTMLVRYVSDKGIEQSIRLVSLDYLGIVAARLRKDTVESRCRVNIIDSMIQSIKLEQEKE 947
Fly 948 GDVTSNNDQFDLEPEEQRTDFLQKILLDFLAVNAQEENLIWDYARHFYLAQWYRDVIYQRRRIND 1012
Fly 1013 GKKGLAFRKSKIRNNRRTNGDYLDTSDSGSCDESDTDTNKKRIHCVDSNDFELNINIYKALEARK 1077
Fly 1078 QYFINKIKPFSVFGE-QNHSSNQHIKTYIDYNNAQLIAQYLATKRPFS--QSFDGCLKKIILVVN 1139
Fly 1140 EPSIAVRTRAMKCLANIVEVDPLVLKRKDMQMGVNQKFLDTAISVREAAVDLVGKFVLSNQDLID 1204
Fly 1205 QYYDMLSTRILDTGVSVRKRVIKILRDICLEYPDFSKIPEICVKMIRRVHDEE-GIQKLVTEVFM 1268
Fly 1269 KMWFTPCTKNDKIGIQRKINHIIDVVNTAHDTGTTWLEGLLMSIFKPRDNMLRSEGCVQEF---- 1329
Fly 1330 ----IKK--NSEPPMD-IVIACQQLADGLVDRLIELEDTDNSRMLGCI---TTLHLLAKVRPQ-- 1382
Fly 1383 --LLVKHAITIEPYL----NIKCHSATAAKFICAVADILEKVVPLVNNASESFLASLEEHLMLLV 1441
Fly 1442 VSRNQAEVTSCVSCLGALVNKITHNF------KLIRDCFQKFYRVLDVSRSQVIQGNNSVDNIYT 1500
Fly 1501 PSFRRSLFTIGILMRYFDFKSP----IAL---GETNDGLPVSICEDVFHCLMFFCR-CTNQEIRK 1557
Fly 1558 QALISLGSFCVLNDGYLTRSELKNLYCEILSSIANDAGFKIICMRNIW-IYLTESEMFMHNKEKE 1621
Fly 1622 WEKQSK---HEDLKEMNDV---SSGMASRIIQLYLEEILECFLNRDDTVRLWAVKVIQIVLRQGL 1680
Fly 1681 VHPVRMVPYLICL--STDHRIESAHRADALLKDIDKTYSGFVNMKVQFGL--------------- 1728
Fly 1729 -----------QLC----------FK-LQKILQINNRGKLEIIRGYASRGP-------------D 1758
Fly 1759 NTTTALNDFLYTLLRTTKPQRRALVQTVTKQFDDQKTSLQQMLYIADNLAYFPYVVQDEPLYLIH 1823
Fly 1824 QIDLLISMAGTHLLATFKEHIKPSDKEGDVLEDD----DDVEDPEVLFNRLPEDLTEIIKCITSA 1884
Fly 1885 QA---------CMLLLILKDHLKE 1899 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nipped-B | NP_001036451.1 | Cohesin_HEAT | 1151..1192 | CDD:289531 | 10/40 (25%) |
Nipped-B_C | 1643..1826 | CDD:289591 | 50/234 (21%) | ||
SCC2 | NP_010466.3 | Cohesin_HEAT | 721..762 | CDD:403845 | 10/40 (25%) |
Nipped-B_C | 1207..1384 | CDD:403897 | 40/182 (22%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C157345732 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1020 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 144 | 1.000 | Inparanoid score | I1163 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0003400 | |
OrthoInspector | 1 | 1.000 | - | - | oto100273 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_103308 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR21704 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R719 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
10 | 9.820 |