Sequence 1: | NP_001036451.1 | Gene: | Nipped-B / 3355136 | FlyBaseID: | FBgn0026401 | Length: | 2077 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001364775.1 | Gene: | scc-2 / 173410 | WormBaseID: | WBGene00004166 | Length: | 2176 | Species: | Caenorhabditis elegans |
Alignment Length: | 2152 | Identity: | 572/2152 - (26%) |
---|---|---|---|
Similarity: | 970/2152 - (45%) | Gaps: | 415/2152 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 131 EAKKMQIDSYSIPECYASPTNLSISNEHQLQDAQACFNQLTSMTSKEIL--EEFSQI--NFKENA 191
Fly 192 TEKDKIDVIE----NSDLNVTKILSQNTL----KKKSNTPERSTVQSI----------------- 231
Fly 232 ----QEQFFIQQQEANYNLKH----------------DLNQVSTNVGQ--IQNISD--TFPQE-- 270
Fly 271 -----PSNFN----------------------LNSVNI----------------PNMLYVQS-PP 291
Fly 292 FTESEPTQAHHSSIEYLKKKKSQILDVSILNRQQVLENTSLHII----------NKSSTYQT--- 343
Fly 344 NQNVSTTTSTSTSSSGKSQVRVCINR----------LSIEDSRLMQQSIKKFVQKSPELARSMGL 398
Fly 399 LQETCQQQHENL------NIIPTSA--------------EECVLE---SRASSTNNTVKIP--ID 438
Fly 439 TFSTIKAD--------EKRSAKRKLAISIGDIPPEQIFSKP---------KMRRVE--RITPLSN 484
Fly 485 TKCVKEEVTRSQTYQQFIRNMDHIIEILD--DSE-------------------SPNFDSEDVDET 528
Fly 529 IECISSKL------LNSMSTDVAKLKAKQALDSIPKNKLTLLINYAMRNVYLARNYFAGTE---- 583
Fly 584 ---DEDEFVDDEVIEK------LLNAMDACLLICNIYST-VSDLQFLQEDNVSHIIKFTQFQLRE 638
Fly 639 TIFPLHDPVYTAKSIKR------TTHRKKIKSHQAQNRSMQLFYLKTVELLKVFVTLFDKCVFVD 697
Fly 698 TIVLPLSTLAIEPFFVDNIETLQFVCLELVTTIFRKERYDKIRNSILGDILTSIDRLPS-SKKNL 761
Fly 762 RPYKLTNNGGN------IQMVTALVLQLIQCATILPDSLCDNGKFSNKPQEGNTFDEEGKKLLQP 820
Fly 821 SQDLLVLQKYDVAVSIGGNFLTTFLNKCKSRSN----ETDFRPLFENFIHDLLATVNKPEWPASE 881
Fly 882 LLLSLLGTMLVRYVSDKGIEQSIRLVSLDYLGIVAARLRKDTVESRCRVNIIDSMI-QSIKLEQE 945
Fly 946 KEGDVTSNNDQFDLEPEEQRTDFLQKILLDFLAVNAQEENLIWDYARHFYLAQWYRDVIYQRRRI 1010
Fly 1011 NDGKKGLAFRKSKIRNNRRTNGDYLDTSDSGSCDESDTDTNKKRIHCVDSNDFELNINIYKALE- 1074
Fly 1075 ---ARKQYFINKIKPFSVFGEQNHSSNQHIKTYIDYNNAQLIAQYLATKRPFSQSFDGCLKKIIL 1136
Fly 1137 -VVNEPSIAVRTRAMKCLANIVEVDPLVLKRKDMQMGVNQKFLDTAISVREAAVDLVGKFVLSNQ 1200
Fly 1201 DLIDQYYDMLSTRILDTGVSVRKRVIKILRDICLEYPDFSKIPEICVKMIRRVHDEEGIQKLVTE 1265
Fly 1266 VFMKMWFTPC-TKNDKIGIQRKINHIIDVV-NTAHDTGTTWLEGLLMSIFKPRDNMLRSEGCVQE 1328
Fly 1329 FIKKNSEPPMDIVIACQQLADGLVDRLIELEDTDNS----------------RMLGCITTLHLLA 1377
Fly 1378 KVRPQLLVKHAITIEPYLNIKCHSATAAKFIC-AVADILEKVVPLVNNASESFLASLEEHLMLLV 1441
Fly 1442 VSRNQAEVTSCVSCLGALVNKITHNFKLIRDCFQKFYRVLDV-SRSQVIQGNNSVDNIYTPSFRR 1505
Fly 1506 SLFTIGILMRYFDFKSPIALGETNDGLPVSICEDVFHCLMFFCRCTNQEIRKQALISLGSFCVLN 1570
Fly 1571 DGYLTRSELKNLYCEILSSIAN---DAGFKIICMRNIWIYLTESEMFMHNKEKEWEKQSKHEDLK 1632
Fly 1633 EMNDVSSGMASRIIQLYLEEILECFLNRDDTVRLWAVKVIQIVLRQGLVHPVRMVPYLICLSTDH 1697
Fly 1698 RIESAHRADALLKDIDKTYSGFVNMKVQFGLQLCFKLQKILQINNRGKLEIIRGY---------- 1752
Fly 1753 ASRGPDNT--TTALNDFLYTLLRTTKPQRRALVQTVTKQFDDQ----KTSLQQMLYIADNLAYFP 1811
Fly 1812 YVVQDEPLYLIHQIDLLISMAGTHLLATFKEHIKPSDKEGDVLEDDDDVEDPEVLFNRLPE--DL 1874
Fly 1875 TEIIKCITSAQACMLLLILKDHLKEMYAITDSKISRYSPSE-QKLYEKAVTRKSVNDFNPKTTID 1938
Fly 1939 VIKKQMSQEKLSTDINFTL---TKEEKLDLVVKYLDFKQLMLKLDP--------------DDGDS 1986
Fly 1987 DADESRD 1993 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nipped-B | NP_001036451.1 | Cohesin_HEAT | 1151..1192 | CDD:289531 | 17/40 (43%) |
Nipped-B_C | 1643..1826 | CDD:289591 | 73/198 (37%) | ||
scc-2 | NP_001364775.1 | DUF5401 | <185..>302 | CDD:375164 | 23/117 (20%) |
Cohesin_HEAT | 1304..1345 | CDD:403845 | 17/40 (43%) | ||
HEAT repeat | 1315..1351 | CDD:410996 | 15/35 (43%) | ||
HEAT repeat | 1321..1351 | CDD:293787 | 13/29 (45%) | ||
HEAT repeat | 1359..1385 | CDD:410996 | 17/25 (68%) | ||
HEAT repeat | 1362..1384 | CDD:293787 | 14/21 (67%) | ||
HEAT repeat | 1395..1423 | CDD:293787 | 16/27 (59%) | ||
Nipped-B_C | 1800..1995 | CDD:403897 | 71/196 (36%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C160165434 | |
Domainoid | 1 | 1.000 | 222 | 1.000 | Domainoid score | I1485 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1020 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 616 | 1.000 | Inparanoid score | I487 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG55220 | |
OrthoDB | 1 | 1.010 | - | - | D608077at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0003400 | |
OrthoInspector | 1 | 1.000 | - | - | oto18595 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_103308 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR21704 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R719 |
SonicParanoid | 1 | 1.000 | - | - | X3855 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
16 | 15.800 |