DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Stlk and hpo

DIOPT Version :10

Sequence 1:NP_001036442.1 Gene:Stlk / 3355135 FlyBaseID:FBgn0046692 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_611427.1 Gene:hpo / 37247 FlyBaseID:FBgn0261456 Length:669 Species:Drosophila melanogaster


Alignment Length:303 Identity:75/303 - (24%)
Similarity:135/303 - (44%) Gaps:51/303 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 YKLLEILKNGMIGTVYKA-EDINNKCLAVKKVSMDQPMEKLTLLFNEVLTVRRLQHRNINTIVSC 73
            |||.|    |..|:|||| ...::..:|:|.|.::..:.::      :..:..:|..:...:|..
  Fly    46 YKLGE----GSYGSVYKAVHKESSSIVAIKLVPVESDLHEI------IKEISIMQQCDSPYVVRY 100

  Fly    74 F--LYKQY-VYLTYKFMCFGNCEVLLKNVYTSGFPEVAIALILKDVLSALTYIHSEHYVHGSVRA 135
            :  .:||| :::..::...|:...::: :......|..||.||.|.|..|.|:|....:|..::|
  Fly   101 YGSYFKQYDLWICMEYCGAGSVSDIMR-LRKKTLTEDEIATILSDTLQGLVYLHLRRKIHRDIKA 164

  Fly   136 KHILLSPR-KAVLSNFSYCQSFISQGEKKTFIFGSTVGIEKELYWTAPEVLYQNLSGYTEKIDIY 199
            .:|||:.. .|.|::|...........|:..:.|:.       :|.||||:.:  .||....||:
  Fly   165 ANILLNTEGYAKLADFGVAGQLTDTMAKRNTVIGTP-------FWMAPEVIEE--IGYDCVADIW 220

  Fly   200 SIGITCCEMANGFQPFKDTELTYMYIEKVRGSLQVLLDKNSLLENQGSLSLEHTNKRIARDVIVN 264
            |:|||..|||.|..|:.:       |..:|...        ::..:...|....::         
  Fly   221 SLGITALEMAEGKPPYGE-------IHPMRAIF--------MIPQKPPPSFREPDR--------- 261

  Fly   265 KSFSENFHQFVELCLNKNPLSRWAASKLMTHSFLKQCRNTSLL 307
              :|..|..||..||.|.|..|..|::|:.|.|::..::.|:|
  Fly   262 --WSTEFIDFVSKCLVKEPDDRATATELLEHEFIRNAKHRSIL 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
StlkNP_001036442.1 PK_STRAD 7..312 CDD:270856 75/303 (25%)
hpoNP_611427.1 STKc_MST1_2 38..293 CDD:132943 72/292 (25%)
SARAH_Hpo 606..661 CDD:439183
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.