DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17528 and Dclk1

DIOPT Version :9

Sequence 1:NP_001036462.1 Gene:CG17528 / 3355134 FlyBaseID:FBgn0261387 Length:748 Species:Drosophila melanogaster
Sequence 2:XP_038959175.1 Gene:Dclk1 / 83825 RGDID:68437 Length:756 Species:Rattus norvegicus


Alignment Length:668 Identity:271/668 - (40%)
Similarity:376/668 - (56%) Gaps:99/668 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 LSNTPTADH------IKKRIPSSRTPTRKALRIKFYRNGDRFYPGITIPVSNERYRSFERLFEDL 192
            ::..|:..|      .:.|...:.:..:||.:::|||||||::.||...:|.:|:||||.|..||
  Rat    27 VNGLPSPTHSAHCSFYRTRTLQTLSSEKKAKKVRFYRNGDRYFKGIVYAISPDRFRSFEALLADL 91

  Fly   193 TRLLEENVKIPGAVRTIYNLCG-KKITSLDELEDGQSYVCSCNNENFKKVEYNTGSQPLSNLPLS 256
            ||.|.:||.:|..|||||.:.| |||:|||:|.:|:||||. :.|.|||:||.....|       
  Rat    92 TRTLSDNVNLPQGVRTIYTIDGLKKISSLDQLVEGESYVCG-SIEPFKKLEYTKNVNP------- 148

  Fly   257 NSRSNSHRLAKCRPSSPLKNGLLAGSSPFPACGGGTGNGSPLIASRLSDRVTVVHPRIVTLIRSG 321
            |...|....:..|..|.|                .|..|.|   |.:.:....:.|::||:||||
  Rat   149 NWSVNVKTTSASRAVSSL----------------ATAKGGP---SEVRENKDFIRPKLVTIIRSG 194

  Fly   322 TKPRRIMRLLLNKRNSPSFDHVLTAITQVVRLDTGYVRKVFTLSGIPVVRLSDFFGSDDVFFAYG 386
            .|||:.:|:||||:.:.||:.|||.||..::||:|.|::::||.|..|:.|.||||.||:|.|.|
  Rat   195 VKPRKAVRILLNKKTAHSFEQVLTDITDAIKLDSGVVKRLYTLDGKQVMCLQDFFGDDDIFIACG 259

  Fly   387 TERINTAEDFKLEAEEQRAINVIRKTMRT-------TGTTCKGPKPKMPIKS------------K 432
            .|:....:||.|:..|.|   |::.|..|       .||| |.|.|....||            .
  Rat   260 PEKFRYQDDFLLDESECR---VVKSTSYTKIASASRRGTT-KSPGPSRRSKSPASTSSVNGTPGS 320

  Fly   433 KVYPPLVDSEPFKAETTPED------DRHAALLTS-------TGMEIN----------------- 467
            ::..|.....|..:.|:|..      .:|....||       :.|:.|                 
  Rat   321 QLSTPRSGKSPSPSPTSPGSLRKQRISQHGGSSTSLSSTKVCSSMDENDGPGEGDELGRRHSLQR 385

  Fly   468 -----------ELPSNIRNTYSLGRIIGDGNFAIVFKIKHRQTGHSYALKIIDKNKCKGKEHYID 521
                       ::|:.|...|.:||.|||||||:|.:...|.|...||||||.|:||:||||.|.
  Rat   386 GWRREESDEGFQIPATITERYKVGRTIGDGNFAVVKECIERSTAREYALKIIKKSKCRGKEHMIQ 450

  Fly   522 AEVRVMKKLNHPHIISLILSVDQNTNMYLVLEYVSGGDLFDAITQVTRFSENQSRIMIRHLGAAM 586
            .||.:::::.||:|:.||..:|..|.:|||:|.|.|||||||||..::::|..:..|:.:|.:|:
  Rat   451 NEVSILRRVKHPNIVLLIEEMDVPTELYLVMELVKGGDLFDAITSTSKYTERDASGMLYNLASAI 515

  Fly   587 TYLHSMGIVHRDIKPENLLVKLDEHGNVLELKLADFGLACEVNDLLYAVCGTPTYVAPEILLEVG 651
            .||||:.|||||||||||||...:.|: ..|||.|||||..|:..||.||||||||||||:.|.|
  Rat   516 KYLHSLNIVHRDIKPENLLVYEHQDGS-KSLKLGDFGLATIVDGPLYTVCGTPTYVAPEIIAETG 579

  Fly   652 YGLKIDVWAAGIILYILLCGFPPFVAPDNQQEPLFDAIISGIYEFPDPYWSDIGDGVRDLIANML 716
            ||||:|:||||:|.||||||||||....:.||.|||.|:.|..:||.|||.::.|..::||..||
  Rat   580 YGLKVDIWAAGVITYILLCGFPPFRGSGDDQEVLFDQILMGQVDFPSPYWDNVSDSAKELINMML 644

  Fly   717 QADPDVRFTSEDILDHSW 734
            ..:.|.||::..:|:|.|
  Rat   645 LVNVDQRFSAVQVLEHPW 662

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17528NP_001036462.1 DCX 153..244 CDD:214711 49/91 (54%)
DCX 308..396 CDD:214711 41/87 (47%)
PKc_like 477..734 CDD:304357 139/256 (54%)
S_TKc 477..734 CDD:214567 139/256 (54%)
Dclk1XP_038959175.1 DCX1_DCLK1 55..143 CDD:340660 49/88 (56%)
DCX2 182..265 CDD:340589 41/82 (50%)
STKc_DCKL1 399..666 CDD:271085 142/265 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 299 1.000 Domainoid score I1388
eggNOG 1 0.900 - - E1_KOG0032
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 454 1.000 Inparanoid score I1548
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D291886at33208
OrthoFinder 1 1.000 - - FOG0002635
OrthoInspector 1 1.000 - - otm45843
orthoMCL 1 0.900 - - OOG6_103814
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.770

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