DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG17528 and CPK18

DIOPT Version :9

Sequence 1:	NP_001036462.1	Gene:	CG17528 / 3355134	FlyBaseID:	FBgn0261387	Length:	748	Species:	Drosophila melanogaster
Sequence 2:	NP_001190932.1	Gene:	CPK18 / 829763	AraportID:	AT4G36070	Length:	561	Species:	Arabidopsis thaliana

Alignment Length:	350	Identity:	107/350 - (30%)
Similarity:	172/350 - (49%)	Gaps:	35/350 - (10%)

- Green bases have known domain annotations that are detailed below.

  Fly   410 RKTMRTTGTTCKGPKPKMPIK---SKKVYPPLVDSEPFKAETTPEDDRHAALLTSTGMEIN-ELP 470
            :.|.|.||:  :.|.|..|.:   |:||      |...|..|.....||...: ..|..|: ...
plant     9 KATRRGTGS--RNPNPDSPTQGKASEKV------SNKNKKNTKKIQLRHQGGI-PYGKRIDFGYA 64

  Fly   471 SNIRNTYSLGRIIGDGNFAIVFKIKHRQTGHSYALKIIDKNKCKGKEHYIDA--EVRVMKKL-NH 532
            .:..|.|::|:::|.|.|...:.......|:..|:|.|||.|........|.  ||::::.| .|
plant    65 KDFDNRYTIGKLLGHGQFGFTYVATDNNNGNRVAVKRIDKAKMTQPIEVEDVKREVKILQALGGH 129

  Fly   533 PHIISLILSVDQNTNMYLVLEYVSGGDLFDAI--TQVTRFSENQSRIMIRHLGAAMTYLHSMGIV 595
            .:::....:.:..|.:|:|:|...||:|.|.|  .:.:|::|..:.:::|.:.......|..|:|
plant   130 ENVVGFHNAFEDKTYIYIVMELCDGGELLDRILAKKDSRYTEKDAAVVVRQMLKVAAECHLRGLV 194

  Fly   596 HRDIKPENLLVKLDEHGNVLELKLADFGLA------CEVNDLLYAVCGTPTYVAPEILLEVGYGL 654
            |||:||||.|.|..|.|:  .||..||||:      .:..|::    |:..|||||:|.... |.
plant   195 HRDMKPENFLFKSTEEGS--SLKATDFGLSDFIKPGVKFQDIV----GSAYYVAPEVLKRRS-GP 252

  Fly   655 KIDVWAAGIILYILLCGFPPFVAPDNQQEPLFDAIISGIYEFPDPYWSDIGDGVRDLIANMLQAD 719
            :.|||:.|:|.||||||..||.  |..|:.:|:.::....:|.:..|..|.:|.:|.:..:|..:
plant   253 ESDVWSIGVITYILLCGRRPFW--DKTQDGIFNEVMRKKPDFREVPWPTISNGAKDFVKKLLVKE 315

  Fly   720 PDVRFTSEDILDHSWTIGNKGNECT 744
            |..|.|:...|.|||.  .:|.|.:
plant   316 PRARLTAAQALSHSWV--KEGGEAS 338

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG17528	NP_001036462.1	DCX	153..244	CDD:214711
		DCX	308..396	CDD:214711
		PKc_like	477..734	CDD:304357	85/267 (32%)
		S_TKc	477..734	CDD:214567	85/267 (32%)
CPK18	NP_001190932.1	STKc_CAMK	70..330	CDD:270687	85/268 (32%)
		S_TKc	71..331	CDD:214567	86/268 (32%)
		PTZ00184	367..514	CDD:185504
		EFh	378..437	CDD:238008
		EFh	459..513	CDD:238008
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0032
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D330091at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.910