Protein Alignment CG17528 and Rp1

DIOPT Version :10

• Sequence 1: NP_001036462.1
• Gene: CG17528 / 3355134
• FlyBaseID: FBgn0261387
• Length: 748
• Species: Drosophila melanogaster
• Sequence 2: XP_008761780.1
• Gene: Rp1 / 681377
• RGDID: 1596713
• Length: 2150
• Species: Rattus norvegicus
• Alignment Length: 504
• Identity: 122/504 - (24%)
• Similarity: 199/504 - (39%)
• Gaps: 147/504 - (29%)

  Fly   131 SACLSNTPTADHIKKRIPSS--RTPTRK--------ALRIKFYRNGDRFYPGITIPVSNERYRSF 185
            |:.:|.||:......|:.||  :.|:|.        |.||.||::||..:.|:.:.|:...:::|
  Rat    23 SSKMSETPSTSFSMIRLTSSEGQVPSRHSNVTHPTVAKRISFYKSGDPQFGGVRVVVNPRSFKTF 87

  Fly   186 ERLFEDLTRLLEENVKIPGAVRTIYNLCGK-KITSLDELEDGQSYVCSCNNENFKKVEYNTGSQP 249
            :.|.::|:|    .|.:|..||.|....|: .||.|:|||||:|||||.|    |||
  Rat    88 DALLDNLSR----KVPLPFGVRNISTPRGRHSITKLEELEDGESYVCSHN----KKV-------- 136

  Fly   250 LSNLPLSNSRSNSHRLAKCRP---------SSPLKNGLLAGSSPFPACGGGTGNGSPLIASRLSD 305
               ||:...:      |:.||         |:.:|  |.:.::..|....|....
  Rat   137 ---LPVDLDK------ARRRPRPWLSSRSISTHVK--LRSATATMPTTAPGLFRA---------- 180

  Fly   306 RVTVVHPRIVTLIRSG-TKPRRIMRLLLNKRNSPSFDHVLTAITQVVRLDTGYVRKVFTLSGIPV 369
                  ||.:.:.|:| .|.||:  :||::|.:.||:..|..:|||::..   |.|::...|..|
  Rat   181 ------PRRLVVFRNGDPKTRRV--VLLSRRITQSFEAFLQYLTQVMQYP---VAKLYATDGRKV 234

  Fly   370 VRLSDFFGSDDVFFAYGTE-----------------------RINTAEDFKLEAEEQRAINVIRK 411
            ..|.....|.....|.|.|                       |::.....|:|..:....:|
  Rat   235 PSLQAVILSSGAVVAAGREPFKPGNYDIQKYLLPVKLPGISHRVHRKGKAKIEKRKMSTHSV--- 296

  Fly   412 TMRTTGTTCKGPKPKM-PIKSKKVYPPLVDSEPFKAETTPEDDRHAALLTSTGMEINELPSNIRN 475
                       |:|:. .:.|:|.|....|     ....||:  :.||.|.....::..||.
  Rat   297 -----------PRPQTDSLASEKTYDCFSD-----FSVAPEN--YLALETHDSQTLSTYPSE--- 340

  Fly   476 TYSLGRIIGDG-NFAIVFKIKHRQTGHSYALKIIDKNKCKGKEHYIDAEVRVMK-KLNHPHIISL 538
                     || ..:|||    .|.|   .:.::.|.:.|.||..:.....|.: .|::....|.
  Rat   341 ---------DGVEKSIVF----NQDG---TMTVVMKVRFKIKEETVKWTTTVNRADLSNDDEKSK 389

  Fly   539 ILSV-----DQNTNMYLVLEYVSGGDLFDAITQ-------VTRFSENQS 575
            |.|.     |:::::.||:......|:.|...|       .|:.:|.|:
  Rat   390 ISSYPGKTEDRSSSLKLVVPCSLSEDITDTTQQGSLTEEENTQMTEQQA 438

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG17528	NP_001036462.1	DCX1	156..239	CDD:340526	33/91 (36%)
		Ubl1_cv_Nsp3_N-like	309..392	CDD:475130	26/106 (25%)
		Protein Kinases, catalytic domain	477..734	CDD:473864	25/113 (22%)
Rp1	XP_008761780.1	Ubl1_cv_Nsp3_N-like	60..138	CDD:475130	35/96 (36%)
		DCX2_RP1	182..257	CDD:340667	24/79 (30%)