DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17528 and stk33

DIOPT Version :9

Sequence 1:NP_001036462.1 Gene:CG17528 / 3355134 FlyBaseID:FBgn0261387 Length:748 Species:Drosophila melanogaster
Sequence 2:NP_001038554.2 Gene:stk33 / 565828 ZFINID:ZDB-GENE-040724-242 Length:500 Species:Danio rerio


Alignment Length:349 Identity:119/349 - (34%)
Similarity:182/349 - (52%) Gaps:48/349 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   413 MRTTGTTCKGPKPKMPIK-------SKKVYPPLVDSEPFKAETTPEDDRHAALLTSTGMEINELP 470
            |..|.|...|.:.||..:       .|||           ..|..||:                 
Zfish     5 MEMTHTNVPGAEKKMACQWTRTNSAEKKV-----------PHTRIEDE----------------- 41

  Fly   471 SNIRNTYSLGRIIGDGNFAIVFKIKHRQTGHSYALKIIDKNKC--KGKEHYIDAEVRVMKKLNHP 533
            |:|:..||.||.:|.|:|.:|.:..|.:|...:|:|.::|.|.  .|.:| ::.||.:||::.|.
Zfish    42 SSIQKIYSFGRKLGQGSFGVVCEATHIETQRKWAIKKVNKEKAGTSGVKH-LEREVSIMKQVKHE 105

  Fly   534 HIISLILSVDQNTNMYLVLEYVSGGDLFDAITQVTRFSENQSRIMIRHLGAAMTYLHSMGIVHRD 598
            |||.|....:....||||.|...||||.|.:.:...|:|.::|.:|:.|..|:.|||...|||||
Zfish   106 HIIHLEEVFETPKRMYLVTELCEGGDLKDLLQKNKHFTEEETRHIIKSLSEAIVYLHKKDIVHRD 170

  Fly   599 IKPENLLVKLDEHGN---VLELKLADFGLACE-----VNDLLYAVCGTPTYVAPEILLEVGYGLK 655
            :|.||:|||....||   ::.:|:.||||:.:     ..::|.|.||||.|:|||::....|..:
Zfish   171 LKLENILVKSCHQGNDNDMVNIKVTDFGLSVQKGGVGSENMLQATCGTPIYMAPEVVNGHQYSQQ 235

  Fly   656 IDVWAAGIILYILLCGFPPFVAPDNQQEPLFDAIISGIYEFPDPYWSDIGDGVRDLIANMLQADP 720
            .|:|:.|:|:|:||||.|||  ..:.:|.|.:.|:.|...|..|.|:.|.|..:::|..:|:.||
Zfish   236 CDLWSIGVIMYMLLCGEPPF--GSSSKERLSEMIMKGELTFSGPVWNTISDAAKNVIRCLLKVDP 298

  Fly   721 DVRFTSEDILDHSWTIGNKGNECT 744
            ..|.|:.::||:.|..|:.....|
Zfish   299 AHRITANELLDNPWISGDTSTAVT 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17528NP_001036462.1 DCX 153..244 CDD:214711
DCX 308..396 CDD:214711
PKc_like 477..734 CDD:304357 102/266 (38%)
S_TKc 477..734 CDD:214567 102/266 (38%)
stk33NP_001038554.2 PKc_like 46..313 CDD:304357 102/269 (38%)
S_TKc 48..313 CDD:214567 102/267 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0032
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.