DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17528 and pskh1

DIOPT Version :9

Sequence 1:NP_001036462.1 Gene:CG17528 / 3355134 FlyBaseID:FBgn0261387 Length:748 Species:Drosophila melanogaster
Sequence 2:NP_001017030.1 Gene:pskh1 / 549784 XenbaseID:XB-GENE-947381 Length:416 Species:Xenopus tropicalis


Alignment Length:355 Identity:106/355 - (29%)
Similarity:183/355 - (51%) Gaps:45/355 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   417 GTTCKGPKPKMPIKS---KKVYPPL-VDSEPF------KAETTPEDDRHAALLTSTGMEINELPS 471
            ||:...|:|...::.   |||.|.| ..|:.:      |::|..:||..:..|.:..::.:...:
 Frog     4 GTSKVLPEPSKNLQQDLVKKVEPCLDRKSDQYNNCITDKSQTFLKDDYLSHSLPNGDLKCHVESA 68

  Fly   472 NIRN----------------TYSLGRIIGDGNFAIVFKIKHRQTGHSYALKIIDKNKCKGKEHYI 520
            ::|.                .|.:..:||.|:|:.|.:::|:.:...||:|:|: .||:......
 Frog    69 HLRRHKIAKYRAKFDPRVTAKYDIKALIGRGSFSRVVRVEHKASKQPYAIKMIE-TKCREGREVC 132

  Fly   521 DAEVRVMKKLNHPHIISLILSVDQNTNMYLVLEYVSGGDLFDAITQVTRFSENQSRIMIRHLGAA 585
            ::|:.|::::.|.:||.||...:....:|:|:|..:||:|||.|.....|:|..:..:::.:...
 Frog   133 ESELNVLRRVRHTNIIQLIEVFESQERVYMVMELATGGELFDRIITKGSFTERDATHVLQMVLEG 197

  Fly   586 MTYLHSMGIVHRDIKPENLLVKLDEHGNV-LELKLADFGLA--------CEVNDLLYAVCGTPTY 641
            :.|||::||.|||:||||||.   .|..: .::.:.|||||        |    |:...||||.|
 Frog   198 VKYLHALGITHRDLKPENLLY---YHPGIDSKIMITDFGLASAQKKGDDC----LMKTTCGTPEY 255

  Fly   642 VAPEILLEVGYGLKIDVWAAGIILYILLCGFPPFVAPDNQQEPLFDAIISGIYEFPDPYWSDIGD 706
            :|||:|:...|...:|:||.|:|.||||.|..||  .|:.:..|:..|:.|.|.:....|..:.:
 Frog   256 IAPEVLVRKPYTNSVDMWALGVISYILLSGTMPF--EDDNRTRLYRQILRGKYSYSGEPWPSVSN 318

  Fly   707 GVRDLIANMLQADPDVRFTSEDILDHSWTI 736
            ..:|.|..:|..:|..|.|:...|.|.|.:
 Frog   319 LAKDFIDRLLMVEPGQRMTATHALKHPWIV 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17528NP_001036462.1 DCX 153..244 CDD:214711
DCX 308..396 CDD:214711
PKc_like 477..734 CDD:304357 89/265 (34%)
S_TKc 477..734 CDD:214567 89/265 (34%)
pskh1NP_001017030.1 STKc_PSKH1 88..347 CDD:270989 89/268 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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