DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG17528 and camk1

DIOPT Version :9

Sequence 1:	NP_001036462.1	Gene:	CG17528 / 3355134	FlyBaseID:	FBgn0261387	Length:	748	Species:	Drosophila melanogaster
Sequence 2:	NP_001016269.1	Gene:	camk1 / 549023	XenbaseID:	XB-GENE-1017139	Length:	383	Species:	Xenopus tropicalis

Alignment Length:	284	Identity:	107/284 - (37%)
Similarity:	168/284 - (59%)	Gaps:	10/284 - (3%)

- Green bases have known domain annotations that are detailed below.

  Fly   459 LTSTGMEINELPSNIRNTYSLGRIIGDGNFAIVFKIKHRQTGHSYALKIIDKNKCKGKEHYIDAE 523
            |...|....:...:||:.|....::|.|.|:.|...:.::|....|:|.|.|...:|||..|:.|
Frog     3 LDEDGPSWKKRAEDIRDIYEFREVLGTGAFSEVVLAEEKKTQKLVAIKCIPKKALEGKETSIENE 67

  Fly   524 VRVMKKLNHPHIISLILSVDQNTNMYLVLEYVSGGDLFDAITQVTRFSENQSRIMIRHLGAAMTY 588
            :.|::|:.|.:|:||....:..:::||:::.||||:|||.|.:...::|..:..:|:.:..|:.|
Frog    68 IAVLRKIKHANIVSLEDIYESRSHLYLIMQLVSGGELFDRIVEKGFYTEKDASQLIKQILDAVKY 132

  Fly   589 LHSMGIVHRDIKPENLL-VKLDEHGNVLELKLADFGLACEV---NDLLYAVCGTPTYVAPEILLE 649
            ||.|||||||:|||||| ..:||...::   ::||||: ::   ..::...||||.|||||:|.:
Frog   133 LHDMGIVHRDLKPENLLYYSIDEDSKIM---ISDFGLS-KIEGSGSVMSTACGTPGYVAPEVLAQ 193

  Fly   650 VGYGLKIDVWAAGIILYILLCGFPPFVAPDNQQEPLFDAIISGIYEFPDPYWSDIGDGVRDLIAN 714
            ..|...:|.|:.|:|.||||||:|||.  |.....||:.|:...|||..|||.||.|..:|.|.:
Frog   194 KPYSKAVDCWSIGVIAYILLCGYPPFY--DENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIQH 256

  Fly   715 MLQADPDVRFTSEDILDHSWTIGN 738
            :::.||:.|.|.:..|.|.|..|:
Frog   257 LMEKDPNKRNTCDQALQHPWIAGD 280

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG17528	NP_001036462.1	DCX	153..244	CDD:214711
		DCX	308..396	CDD:214711
		PKc_like	477..734	CDD:304357	101/260 (39%)
		S_TKc	477..734	CDD:214567	101/260 (39%)
camk1	NP_001016269.1	STKc_CaMKI_alpha	17..279	CDD:271069	104/267 (39%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D330091at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920