DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17528 and Dcx

DIOPT Version :9

Sequence 1:NP_001036462.1 Gene:CG17528 / 3355134 FlyBaseID:FBgn0261387 Length:748 Species:Drosophila melanogaster
Sequence 2:NP_001103692.1 Gene:Dcx / 13193 MGIID:1277171 Length:366 Species:Mus musculus


Alignment Length:386 Identity:135/386 - (34%)
Similarity:198/386 - (51%) Gaps:89/386 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 ELD----DLRNLHSSSLTNSVVVGKSTGSLNGVYSITSVTS----ETKTLESVVTTNSASGSACL 134
            |||    |.|:..|.::..|        .:||:.|.|....    .|:||::            |
Mouse     2 ELDFGHFDERDKASRNMRGS--------RMNGLPSPTHSAHCSFYRTRTLQA------------L 46

  Fly   135 SNTPTADHIKKRIPSSRTPTRKALRIKFYRNGDRFYPGITIPVSNERYRSFERLFEDLTRLLEEN 199
            ||                 .:||.:::|||||||::.||...||::|:|||:.|..||||.|.:|
Mouse    47 SN-----------------EKKAKKVRFYRNGDRYFKGIVYAVSSDRFRSFDALLADLTRSLSDN 94

  Fly   200 VKIPGAVRTIYNLCG-KKITSLDELEDGQSYVCSCNNENFKKVEYNTGSQPLSNLPLSNSRSNSH 263
            :.:|..||.||.:.| :||.|:||||:|:|||||.:| .||||||.....|..::   |.:::::
Mouse    95 INLPQGVRYIYTIDGSRKIGSMDELEEGESYVCSSDN-FFKKVEYTKNVNPNWSV---NVKTSAN 155

  Fly   264 RLAKCRPSSPLKNGLLAGSSPFPACGGGTGNGSPLIASRLSDRVTVVHPRIVTLIRSGTKPRRIM 328
            ..|   |.|      ||.|:                :::..:....|.|::||:||||.|||:.:
Mouse   156 MKA---PQS------LASSN----------------SAQARENKDFVRPKLVTIIRSGVKPRKAV 195

  Fly   329 RLLLNKRNSPSFDHVLTAITQVVRLDTGYVRKVFTLSGIPVVRLSDFFGSDDVFFAYGTERINTA 393
            |:||||:.:.||:.|||.||:.::|:||.|:|::||.|..|..|.||||.||||.|.|.|:...|
Mouse   196 RVLLNKKTAHSFEQVLTDITEAIKLETGVVKKLYTLDGKQVTCLHDFFGDDDVFIACGPEKFRYA 260

  Fly   394 -EDFKLEAEEQRAINVIRKTMRTTGTTCKGPKPK-MPIKSKKVYPPLVDSEPFKAETTPED 452
             :||.|:..|.|       .|:...:...|||.. .|.|:....|     .|.:...:|.|
Mouse   261 QDDFSLDENECR-------VMKGNPSAAAGPKASPTPQKTSAKSP-----GPMRRSKSPAD 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17528NP_001036462.1 DCX 153..244 CDD:214711 49/91 (54%)
DCX 308..396 CDD:214711 45/88 (51%)
PKc_like 477..734 CDD:304357
S_TKc 477..734 CDD:214567
DcxNP_001103692.1 DCX1_DCX 51..139 CDD:340529 49/88 (56%)
DCX2 176..259 CDD:340589 44/82 (54%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 275..366 9/40 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 70 1.000 Domainoid score I9505
eggNOG 1 0.900 - - E1_KOG3757
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D291886at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm43763
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.780

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