DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17528 and Camk2b

DIOPT Version :9

Sequence 1:NP_001036462.1 Gene:CG17528 / 3355134 FlyBaseID:FBgn0261387 Length:748 Species:Drosophila melanogaster
Sequence 2:XP_006514527.1 Gene:Camk2b / 12323 MGIID:88257 Length:667 Species:Mus musculus


Alignment Length:262 Identity:104/262 - (39%)
Similarity:150/262 - (57%) Gaps:8/262 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   477 YSLGRIIGDGNFAIVFKIKHRQTGHSYALKIIDKNKCKGKEHY-IDAEVRVMKKLNHPHIISLIL 540
            |.|...||.|.|::|.:.....|||.||.|||:..|...::|. ::.|.|:.:.|.|.:|:.|..
Mouse    14 YQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHD 78

  Fly   541 SVDQNTNMYLVLEYVSGGDLFDAITQVTRFSENQSRIMIRHLGAAMTYLHSMGIVHRDIKPENLL 605
            |:.:....|||.:.|:||:||:.|.....:||..:...|:.:..|:.:.|.||:||||:||||||
Mouse    79 SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLL 143

  Fly   606 VKLDEHGNVLELKLADFGLACEV---NDLLYAVCGTPTYVAPEILLEVGYGLKIDVWAAGIILYI 667
            :.....|  ..:||||||||.||   ....:...|||.|::||:|.:..||..:|:||.|:||||
Mouse   144 LASKCKG--AAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYI 206

  Fly   668 LLCGFPPFVAPDNQQEPLFDAIISGIYEFPDPYWSDIGDGVRDLIANMLQADPDVRFTSEDILDH 732
            ||.|:|||.  |..|..|:..|.:|.|:||.|.|..:....::||..||..:|..|.|:.:.|.|
Mouse   207 LLVGYPPFW--DEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITAHEALKH 269

  Fly   733 SW 734
            .|
Mouse   270 PW 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17528NP_001036462.1 DCX 153..244 CDD:214711
DCX 308..396 CDD:214711
PKc_like 477..734 CDD:304357 103/260 (40%)
S_TKc 477..734 CDD:214567 103/260 (40%)
Camk2bXP_006514527.1 STKc_CaMKII 12..303 CDD:270988 104/262 (40%)
CaMKII_AD 535..662 CDD:285524
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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