DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17528 and rp1l1b

DIOPT Version :10

Sequence 1:NP_001036462.1 Gene:CG17528 / 3355134 FlyBaseID:FBgn0261387 Length:748 Species:Drosophila melanogaster
Sequence 2:XP_017208190.1 Gene:rp1l1b / 101885561 ZFINID:ZDB-GENE-091204-67 Length:3919 Species:Danio rerio


Alignment Length:613 Identity:116/613 - (18%)
Similarity:194/613 - (31%) Gaps:212/613 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KVKINSLH--CNDAVLSSLQASPSATSPQSVPSKANVVTEASIIEKTNQPHNVQEDNNYNRDCDS 67
            :.|.:.:|  |:.   |:..|..||:|.:..|::.:.:......:..:...|:.:|:...|...:
Zfish   235 ETKRSVIHPRCDS---SNRSARLSASSEKLFPNRLDSLPPGDRGDCVHAGENMMDDDIEKRVLVN 296

  Fly    68 PESSSSEQDKELDDLRNLHSSSLTNSVVVGKSTGSLNGVYSITSVTSETKTLESVVTTNSASGSA 132
            .:.|.|.:.|.  ..|.||:.:|..|..|.||..:.|..:.::         :...:.:..|..:
Zfish   297 KDGSLSMEMKV--RFRLLHNETLHWSTEVKKSKSTFNDSHLVS---------DDACSVSHGSSES 350

  Fly   133 CLSNTPTADHIKKRIPSSRTPTRKALRIKFYRNGDRFYPGITIPVSNERY--RSFERLFED---- 191
            |    ..||.:..                    |:          :||.|  :.::|.||:    
Zfish   351 C----SEADSLSA--------------------GE----------ANETYHTKRYQRHFEESHCQ 381

  Fly   192 --LTRLLEENV---KIP---GAVRTIYN----------LCGKKITSLDELEDGQSYV------CS 232
              ..|..|.::   .:|   ||||.|.:          :|.|..|........:.|.      .:
Zfish   382 HCCARCQEYDIWKNPVPPSQGAVRRIRSSSSSASSRRIVCKKASTDSIRTVSSEEYTEHVVEKAT 446

  Fly   233 CNNENFKKVEYNTGSQPLSNLPLSNSRSNSHRLAKCRPSSPLKNGLLAGSSPFPACGGGTGNGSP 297
            |..:.|.:....|..|...|...|.|..:|                   .||           .|
Zfish   447 CIQQTFGQQVDTTIEQCTINHCCSRSEVSS-------------------ISP-----------KP 481

  Fly   298 LIASRLSDRVTVVHPRIVTLIRSGTKPRRIMRLLLNKRNSPSF-------DHVLTAITQVVRLDT 355
            ...|.:.||...:|...                  |:.|.|..       ||:...|||.|..|.
Zfish   482 KSTSTVDDRCENIHASD------------------NEENRPDVISSNLPKDHLSVQITQQVEEDE 528

  Fly   356 GYVRKVFTLSGIPVVRLSDFFGSDDVFFAYGTERINTAEDFKLEAEEQRAINVIRKTMRTTGTTC 420
            ..:..:.:.|.|......|  ..|||     ...|:.|...:.:.||.:.    .:|.:.:.:.|
Zfish   529 RSISVLSSSSQILASLKED--QDDDV-----NPTISRASHDQQDDEESKD----PETNQCSASPC 582

  Fly   421 KGP------KPKMPIKS---------KKVYPPLVDSEPFKAET--------------------TP 450
            |.|      .|:.|.|:         :|...|.|.:|..::|.                    ||
Zfish   583 KSPASLRHLSPRPPSKASSSGRSKTYRKFASPEVGTEEVRSEASASPNILSGPKTCKCVVTKDTP 647

  Fly   451 E---------------DDRHAALLTSTGMEINELPSNIRNTYSLGRIIGDGNFAIVFKIKHRQTG 500
            |               .:..|...||| ..::||.::..|          ||.|.:...|...: 
Zfish   648 EASETNDEVEDMQVSVTEERALSATST-KSLSELSTSCEN----------GNPAEIIPEKRSLS- 700

  Fly   501 HSYALKIIDKNKCKG-KEHYIDAEVRVM 527
               ||.|...|..|. |.:.:|.:.|.:
Zfish   701 ---ALSIKSNNSRKSVKTNVLDYDERAL 725

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17528NP_001036462.1 DCX1 156..239 CDD:340526 20/112 (18%)
Ubl1_cv_Nsp3_N-like 309..392 CDD:475130 18/89 (20%)
Protein Kinases, catalytic domain 477..734 CDD:473864 12/52 (23%)
rp1l1bXP_017208190.1 Ubl1_cv_Nsp3_N-like <1..62 CDD:475130
Ubl1_cv_Nsp3_N-like 119..194 CDD:475130
PHA03307 1828..>2067 CDD:223039
MDN1 2814..3693 CDD:444083
Blue background indicates that the domain is not in the aligned region.

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