DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17528 and rp1l1a

DIOPT Version :9

Sequence 1:NP_001036462.1 Gene:CG17528 / 3355134 FlyBaseID:FBgn0261387 Length:748 Species:Drosophila melanogaster
Sequence 2:XP_005169865.1 Gene:rp1l1a / 101882236 ZFINID:ZDB-GENE-120711-1 Length:2394 Species:Danio rerio


Alignment Length:396 Identity:77/396 - (19%)
Similarity:145/396 - (36%) Gaps:116/396 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 IPSSRTPTRKALRIKFYRNGDRFYPGITIPVSNERYRSFERLFEDLTRLLEENVKIPGAVRTIYN 211
            |.::.:|.:   ||.||::||..:.|:.:.|....::.|:.|.:||:    :.|.:|..||||..
Zfish    33 IVTASSPVK---RITFYKSGDSQFKGVKMAVHKRTFKCFDALLDDLS----QKVPLPFGVRTITT 90

  Fly   212 LCG-KKITSLDELEDGQSYVCS-------CNNENFKKVE--YNTGSQPLSNLPLSNSRSNSHRLA 266
            ..| ..|..|::.|||..|:||       .|.|...|.:  ::..|.|           |:.|..
Zfish    91 PRGTHSIKHLEQFEDGGCYLCSDRRYVKPINMEEVGKRQAVWHHHSHP-----------NNTRRK 144

  Fly   267 KCRPSSPLKNGLLAGSSPFPACGGGTGNGSPLIASRLSDRVTVVHPRIVTLIRSGTKPRRIMRLL 331
            ..||..||                   :|......|        ||:.:.|::: :.|.....::
Zfish   145 PSRPDEPL-------------------SGHQHHHHR--------HPKRIILVKN-SDPAVRRSII 181

  Fly   332 LNKRNSPSFDHVLTAITQVVRLDTGYVRKVFTLSGIPVVRLSDFFGSDDVFFAYG--------TE 388
            |::|.:.|.......|:::::.   :|::::||.|..:..:........|....|        .|
Zfish   182 LSRRTARSLRVFTEEISELMQC---HVKRLYTLEGRKIDSIQSLMQCPSVLVCVGREPFRPLLVE 243

  Fly   389 RINTAEDFKLEA--------------EEQRAINV---IRKTMRTTGTTCKGPKPKMPIKSKKVY- 435
            .:....|.||..              |.::.:|.   .:|::....:.......:..:.|:|.| 
Zfish   244 SLKKLSDEKLPGVGTRSHSSVCSEGHESKKNVNFGLETKKSIIHPRSDSSNRSTRFSLSSEKSYQ 308

  Fly   436 ---------PPLVDSEPFKAETTPEDDRHAALLTSTGMEINELPSNIRNTYSLGRIIGDGNFAIV 491
                     ...|.:.|:..|....||....:|      :|:                ||:.::.
Zfish   309 NGLCTTPGQSGCVSTCPYVKEVVMNDDIEKRVL------VNK----------------DGSLSVE 351

  Fly   492 FKIKHR 497
            .|::.|
Zfish   352 MKVRFR 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17528NP_001036462.1 DCX 153..244 CDD:214711 31/100 (31%)
DCX 308..396 CDD:214711 15/95 (16%)
PKc_like 477..734 CDD:304357 4/21 (19%)
S_TKc 477..734 CDD:214567 4/21 (19%)
rp1l1aXP_005169865.1 DCX 41..119 CDD:176357 27/84 (32%)
UBQ 164..239 CDD:294102 12/78 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3757
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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