DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17528 and rp1l1a

DIOPT Version :10

Sequence 1:NP_001036462.1 Gene:CG17528 / 3355134 FlyBaseID:FBgn0261387 Length:748 Species:Drosophila melanogaster
Sequence 2:XP_005169865.1 Gene:rp1l1a / 101882236 ZFINID:ZDB-GENE-120711-1 Length:2394 Species:Danio rerio


Alignment Length:396 Identity:77/396 - (19%)
Similarity:145/396 - (36%) Gaps:116/396 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 IPSSRTPTRKALRIKFYRNGDRFYPGITIPVSNERYRSFERLFEDLTRLLEENVKIPGAVRTIYN 211
            |.::.:|.:   ||.||::||..:.|:.:.|....::.|:.|.:||:    :.|.:|..||||..
Zfish    33 IVTASSPVK---RITFYKSGDSQFKGVKMAVHKRTFKCFDALLDDLS----QKVPLPFGVRTITT 90

  Fly   212 LCG-KKITSLDELEDGQSYVCS-------CNNENFKKVE--YNTGSQPLSNLPLSNSRSNSHRLA 266
            ..| ..|..|::.|||..|:||       .|.|...|.:  ::..|.|           |:.|..
Zfish    91 PRGTHSIKHLEQFEDGGCYLCSDRRYVKPINMEEVGKRQAVWHHHSHP-----------NNTRRK 144

  Fly   267 KCRPSSPLKNGLLAGSSPFPACGGGTGNGSPLIASRLSDRVTVVHPRIVTLIRSGTKPRRIMRLL 331
            ..||..||                   :|......|        ||:.:.|::: :.|.....::
Zfish   145 PSRPDEPL-------------------SGHQHHHHR--------HPKRIILVKN-SDPAVRRSII 181

  Fly   332 LNKRNSPSFDHVLTAITQVVRLDTGYVRKVFTLSGIPVVRLSDFFGSDDVFFAYG--------TE 388
            |::|.:.|.......|:::::.   :|::::||.|..:..:........|....|        .|
Zfish   182 LSRRTARSLRVFTEEISELMQC---HVKRLYTLEGRKIDSIQSLMQCPSVLVCVGREPFRPLLVE 243

  Fly   389 RINTAEDFKLEA--------------EEQRAINV---IRKTMRTTGTTCKGPKPKMPIKSKKVY- 435
            .:....|.||..              |.::.:|.   .:|::....:.......:..:.|:|.| 
Zfish   244 SLKKLSDEKLPGVGTRSHSSVCSEGHESKKNVNFGLETKKSIIHPRSDSSNRSTRFSLSSEKSYQ 308

  Fly   436 ---------PPLVDSEPFKAETTPEDDRHAALLTSTGMEINELPSNIRNTYSLGRIIGDGNFAIV 491
                     ...|.:.|:..|....||....:|      :|:                ||:.::.
Zfish   309 NGLCTTPGQSGCVSTCPYVKEVVMNDDIEKRVL------VNK----------------DGSLSVE 351

  Fly   492 FKIKHR 497
            .|::.|
Zfish   352 MKVRFR 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17528NP_001036462.1 DCX1 156..239 CDD:340526 29/90 (32%)
Ubl1_cv_Nsp3_N-like 309..392 CDD:475130 15/90 (17%)
Protein Kinases, catalytic domain 477..734 CDD:473864 4/21 (19%)
rp1l1aXP_005169865.1 DCX1_RP1L1 41..119 CDD:340666 27/84 (32%)
DCX2_RP1L1 164..239 CDD:340668 12/78 (15%)
PTZ00112 965..>1287 CDD:240274
PTZ00341 <2123..>2305 CDD:173534
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.