DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment conu and AT4G03100

DIOPT Version :9

Sequence 1:	NP_001036454.1	Gene:	conu / 3355133	FlyBaseID:	FBgn0039994	Length:	629	Species:	Drosophila melanogaster
Sequence 2:	NP_192219.2	Gene:	AT4G03100 / 828092	AraportID:	AT4G03100	Length:	430	Species:	Arabidopsis thaliana

Alignment Length:	257	Identity:	58/257 - (22%)
Similarity:	109/257 - (42%)	Gaps:	36/257 - (14%)

- Green bases have known domain annotations that are detailed below.

  Fly   355 NLFGVSINALIRRDQQVTGTDSSLVPLFLEKLIGELLRRGSREEGLLRIGGHKQKTELLYNELES 419
            ::||||..::.....:...:..:::.|..|:|..:   :|.:.||:.||.....:.|.:.::|..
plant   121 SVFGVSAESMQCSYDEKGNSVPTILLLMQERLYSQ---QGLKAEGIFRINPENSQEEHVRDQLNR 182

  Fly   420 TFYQNPDNLDNLFRTATVHELSSLLKRWLRELPQPLLTNELIQLFYQCHTLPSIDQMNALSILCH 484
            ...  |:|:|       ||.|:.|:|.|.||||..:|.....:....|:|     :..::.::..
plant   183 GIV--PENID-------VHCLAGLIKAWFRELPSGVLDGLSPEEVLNCNT-----EDESVELIKQ 233

  Fly   485 LLPPENRNTLRSLLSFFNIIINLKDINKMNVHNVATIMAPSMFPPRYIHPSDNNSIAEQVRMAAQ 549
            |.|.|:. .|...:.....::..::.||||..|:|.:.||:|        :........:..|.|
plant   234 LKPTESA-LLNWAVDLMADVVEEEESNKMNARNIAMVFAPNM--------TQMTDPLTALMHAVQ 289

  Fly   550 CCRLTNILILRGEKLFQVPNNLIVESQKTMMGKKGWHRHRNSNEITAKPSGKASNVGVGHDS 611
            ...|...||.:          .:.|.::...|.:|:....:||..|...|..|.::.|..:|
plant   290 VMNLLKTLITK----------TLAEREENATGSEGYSPSHSSNSQTDSDSDNAQDMEVSCES 341

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
conu	NP_001036454.1	RhoGAP_ARHGAP18	356..576	CDD:239856	49/219 (22%)
AT4G03100	NP_192219.2	PBD	80..113	CDD:197628
AT4G03100	NP_192219.2	RhoGAP	140..298	CDD:214618	42/183 (23%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	75	1.000	Inparanoid score	I2422
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.960