DRSC/TRiP Functional Genomics Resources

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Protein Alignment conu and Arhgap10

DIOPT Version :9

Sequence 1:NP_001036454.1 Gene:conu / 3355133 FlyBaseID:FBgn0039994 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_084389.2 Gene:Arhgap10 / 78514 MGIID:1925764 Length:786 Species:Mus musculus


Alignment Length:582 Identity:120/582 - (20%)
Similarity:218/582 - (37%) Gaps:144/582 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 EQGLEVSKKDLEPILTTLSKPHAEAIVQLVRTLNKTVRVRTKSRPKRKPDIRDVFREFDEQ---- 120
            |:.::.|.::....|..|.:......:.:..||.|.:.   |.|.::...:::..::||::    
Mouse    80 ERCIDASLREFSNFLKNLEEQREIMALSVTETLIKPLE---KFRKEQLGAVKEEKKKFDKETEKN 141

  Fly   121 -GTVTRSRSATPDSLDS------LQIDEAWTNNSLPTFVNVYEKNTETAIQCVEQSNEIYLKQNL 178
             ..:.:..:.:....||      ||:::   |..     :.|    |.:::.|.:..||   |..
Mouse   142 YSLIDKHLTLSARKKDSHLQEADLQVEQ---NRQ-----HFY----ELSLEYVCKLQEI---QER 191

  Fly   179 RRTPSAPPKSGTYADIF----RGSQVRCDIPLYSADGVELLGYSRIGTIQFPRNRSVSDPFCSIG 239
            ::.....|....:..:|    :|.::..|...|..: :::       .||..|||....      
Mouse   192 KKFEFVEPMLSFFQGMFTFYHQGHELSKDFNHYKME-LQI-------NIQNTRNRFEGT------ 242

  Fly   240 RSKESRSENDAR---SQKKKSSEVLSASENECGRLLPMP------------------YNVLSFE- 282
            ||:.....|..|   ..:|::|:..:..........|.|                  :|::.|| 
Mouse   243 RSEVEELMNKIRQNPKDQKRASQFTAEGYLYVQEKRPAPFGSSWVKHYCMYRKTAKKFNMIPFEH 307

  Fly   283 --------------SIC----RDSSSLDSCEVLDTCDIPSTLFTDVVLISETDMKRLQTILWLEL 329
                          ..|    .||:....|..::..|.|....| |...||.:.|:     ||| 
Mouse   308 RSGGKLGDGEAFFLKECTKRHMDSTDRRFCFDIEAADRPGVPLT-VQAFSEEERKQ-----WLE- 365

  Fly   330 ATIFDRNKVSLDKRKPFKRRRKEEGNLFGVSINALIRRDQQVTGTDSSLVPLFLEKLIGELLRRG 394
                     :|..::.          ||.....|::.|.:.....|.....: |.|.|..:..||
Mouse   366 ---------ALGGKEA----------LFHTFNRAIVPRPEGGAQLDKMGFTI-LRKCISAVETRG 410

  Fly   395 SREEGLLRIGGHKQKTELLYNELESTFYQNPDNLDNLFRTA--TVHELSSLLKRWLRELPQPLLT 457
            ..::||.|:.|...|.:.|.:.|......|..:|:|   :|  .|..::|.||::||.||:||:|
Mouse   411 INDQGLYRVVGVSSKVQRLLSMLMDVKMCNELDLEN---SADWEVKTVTSALKQYLRSLPEPLMT 472

  Fly   458 NELIQLFYQCHTLPS-----IDQMNALSILCHLLPPENRNTLRSLLSFFNIIINLKDINKMNVHN 517
            .||.:.|    .:|:     ..::||:..|.|.||.:|:..|..|:.....:.:....|.|.|.|
Mouse   473 YELHRDF----IVPAKSGSPESRVNAIHFLVHKLPEKNKEMLDILVKHLTNVSSHSKQNLMTVAN 533

  Fly   518 VATIMAPSMFPPRYIHPSDNNSIAEQVRMAAQCCRLTN----ILILRGEKLFQV-PNNLIVE 574
            :..:..|::..|:           |:...|....:..|    |||...||:|:. |:....|
Mouse   534 LGVVFGPTLMRPQ-----------EETVAAIMDLKFQNIVVEILIENHEKIFRTSPDTTFAE 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
conuNP_001036454.1 RhoGAP_ARHGAP18 356..576 CDD:239856 62/231 (27%)
Arhgap10NP_084389.2 BAR 19..225 CDD:299863 26/162 (16%)
BAR-PH_GRAF_family 267..372 CDD:269953 20/120 (17%)
PH 269..367 CDD:278594 19/113 (17%)
RhoGAP_Graf 367..569 CDD:239839 58/230 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 584..609 1/1 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 622..714
SH3_GRAF2 732..785 CDD:212998
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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