DRSC/TRiP Functional Genomics Resources

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Protein Alignment conu and Arhgap36

DIOPT Version :9

Sequence 1:NP_001036454.1 Gene:conu / 3355133 FlyBaseID:FBgn0039994 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_017174121.1 Gene:Arhgap36 / 75404 MGIID:1922654 Length:602 Species:Mus musculus


Alignment Length:474 Identity:97/474 - (20%)
Similarity:158/474 - (33%) Gaps:162/474 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   261 LSASENECGRLLPMPYNVLSF---ESICRDSSSLDSCEVLDTCDIPSTLFTDVVLISETDMKRLQ 322
            |.|....|..::|....:.:|   .|:...:...:|...:|...|.|        :||.:..:||
Mouse     8 LKAIRTRCPIIIPFLLLLSAFIFLVSVLGGAPGQNSDRSMDMVSIHS--------LSELERLKLQ 64

  Fly   323 TILWLELATIFDRNKVSLDKRKPFKR--------------RRKEEGNLFG-----VSINALIRRD 368
            ...:.||......::...|:..|..|              .|......||     |.:|.|.||.
Mouse    65 ETAYHELVARHFLSEFKPDRALPTDRPNTLEKWFLMLRGQDRAASLKTFGIRLEEVLVNELTRRK 129

  Fly   369 QQVTGTDSSLVPLF-----------------LEKLIG-----------------ELLRRGSR--- 396
            |:      .|.|..                 :::::|                 |..|||.|   
Mouse   130 QR------ELTPTMQVEDINGSTGRRRRGNVVQRMLGRMRRFFSRRRNEPTLPREFTRRGRRGAV 188

  Fly   397 --------EEGLL----------------RIGGHKQKTEL------------------------- 412
                    |.|.|                |:.|.|:|..|                         
Mouse   189 SADSADELENGALLLQILQLSQLSSPIGQRLLGSKRKMSLNPIAQQIPQIVETCCKFIEKHGLSS 253

  Fly   413 ------LYN-----ELESTFYQNPD-NLDNLFRTATVHELSSLLKRWLRELPQPLLTNELIQLFY 465
                  .|:     ||...|.:..| .||:   :..||:::.|||.:.||:..|||.::|...|.
Mouse   254 VGIFTIEYSLRRVLELRELFDKGLDIVLDD---SVNVHDVAELLKEFFREMKDPLLPDDLYMSFL 315

  Fly   466 QCHTLPSIDQMNALSILCHLLPPENRNTLRSLL-SFFNIIINLKDI----------NKMNVHNVA 519
            ...||...||::||.:|.:|:||.:.:||..|| :...|..|.:|.          |:|...|:|
Mouse   316 LTATLKPKDQVSALQLLVYLMPPCHSDTLERLLKALHKITENCEDSIGVDGQLVPGNRMTSTNLA 380

  Fly   520 TIMAPSMFPPRYIHPSDNNSIAEQVRMAAQCCRLTNILILRGEKLFQVPNNLIVESQKTMMGKKG 584
            .:...::.....:...::......:........:...:|...:.|||||.::..|     :.|:.
Mouse   381 LVFGTALLKKGKLANKESRKTKLGIDHYVASVNVVRAMIDNWDILFQVPPHIQKE-----VAKRV 440

  Fly   585 WH---------RHRNSNEI 594
            |.         |.||..:|
Mouse   441 WKSSPEALDFIRRRNLRKI 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
conuNP_001036454.1 RhoGAP_ARHGAP18 356..576 CDD:239856 71/333 (21%)
Arhgap36XP_017174121.1 RhoGAP_ARHGAP6 227..432 CDD:239841 47/207 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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