DRSC/TRiP Functional Genomics Resources

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Protein Alignment conu and Arhgap18

DIOPT Version :9

Sequence 1:NP_001036454.1 Gene:conu / 3355133 FlyBaseID:FBgn0039994 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_789807.1 Gene:Arhgap18 / 73910 MGIID:1921160 Length:663 Species:Mus musculus


Alignment Length:614 Identity:161/614 - (26%)
Similarity:274/614 - (44%) Gaps:141/614 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 SDDQD-FSEFLNEYYLQ------SNSQSIEPEASY-----EDGEMEAEWLVSAGYPELTKPFEQG 62
            |..|| ..|.:..|:.:      ||....|.:.:.     ::||:|.|||..||   |:..|.:.
Mouse    63 SSSQDSLDESMEAYWTELENIKRSNENRQEGQEAIVVKEPDEGELEEEWLKEAG---LSNLFGES 124

  Fly    63 LEVSKKDLEPILTTLSKPHAEAIVQLVRTLNKTVRVRTKSRPKRKPDIRDVFREFDEQGTVTRSR 127
            ::..::.: ..|:||::..|.|:.:.|.|:::|:|.:.|....|  |:||:|.:..|      ::
Mouse   125 IDDPQESI-LFLSTLTRTQAAAVQKRVETVSQTLRKKNKQHHIR--DVRDIFAQQRE------AQ 180

  Fly   128 SATPDSLDSLQIDEAWTNNSLPTFVNVYEKNTETAIQCVEQSNEIYLKQNLRRTPSAPPKSGTYA 192
            ...||..|   :....||           :|..........|..:..|:.:.|.|...|.|.|  
Mouse   181 EKPPDDSD---LRSVRTN-----------ENKGQGKDDQPSSGAVDSKEQISRVPEDTPASET-- 229

  Fly   193 DIFRGSQVRCDIPLYSADGVELLGYSRIGTIQFPRNRSVSDPFCSIGRSKESRSENDARSQKKKS 257
                      ||.|               .:.|.........|     |||       |:||..|
Mouse   230 ----------DINL---------------EVSFAEQAVNQKEF-----SKE-------RTQKISS 257

  Fly   258 SEVLSASENECGRLLPMPYNVLSFESICRDSSSLDSCEVLDTCDIPSTLFTDVVLISETDMKRLQ 322
            ::.|.:..      ||            :|.:.             :|...|   ::..|||::.
Mouse   258 NDSLPSFR------LP------------KDKTG-------------TTRIGD---LAPQDMKKVC 288

  Fly   323 TILWLELATIFDRNKVSLDKRKPFKRRRKEEGNLFGVSINALIRRDQ-QVTGTDSSLVPLFLEKL 386
            ::..:||..::|...:...::|..|.:.::.| |||:.:..|:.:|| :|.||   .:||..:||
Mouse   289 SLSLIELTALYDVLGLEFKQQKAVKIKTRDSG-LFGIPLTILLEQDQRKVPGT---RIPLIFQKL 349

  Fly   387 IGELLRRGSRE-EGLLRIGGHKQKTELLYNELESTFYQNPDNLDNLFRTATVHELSSLLKRWLRE 450
            |.. :..||.| ||||||.|...:.:.|..|||:.||:...|.:::.:    |:.:||||.:|||
Mouse   350 ISR-IEEGSLETEGLLRIPGAAMRIKNLCQELEAKFYEGTFNWESVKQ----HDAASLLKLFLRE 409

  Fly   451 LPQPLLTNELIQLFYQCHTLPS-IDQMNALSILCHLLPPENRNTLRSLLSFFNIIINLKDINKMN 514
            ||||||:.|.::.|.....||: .:|:.||::|..|||..||:||::||.|...:|:.|:.|||.
Mouse   410 LPQPLLSMEYLKAFQAVQNLPTRKEQLQALNLLVILLPDANRDTLKALLEFLQRVIDNKEKNKMT 474

  Fly   515 VHNVATIMAPSMFPPRYIHPSD-NNSIAEQVRMAAQCCRLTNILILRGEKLFQVPNNLIVE---- 574
            ..|||.:|||::|   ..|... .:|...:..|||....:.::||...:.|:.:|..::::    
Mouse   475 AGNVAMVMAPNLF---MCHTLGLKSSEQREFEMAAGTANVMHLLIRYQKILWTIPKFIVIQVRKQ 536

  Fly   575 ----------SQKTMMGKKGWHRHRNSNE 593
                      :.|.::.|..:.|.::..:
Mouse   537 NIENQKKERKAMKKLLKKMAYDREKHEKQ 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
conuNP_001036454.1 RhoGAP_ARHGAP18 356..576 CDD:239856 84/237 (35%)
Arhgap18NP_789807.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 14..73 4/9 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 85..106 3/20 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 173..228 13/74 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 245..277 13/74 (18%)
RhoGAP_ARHGAP18 321..534 CDD:239856 84/223 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167838664
Domainoid 1 1.000 110 1.000 Domainoid score I6305
eggNOG 1 0.900 - - E1_KOG2200
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 187 1.000 Inparanoid score I3900
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D309300at33208
OrthoFinder 1 1.000 - - FOG0002326
OrthoInspector 1 1.000 - - otm44275
orthoMCL 1 0.900 - - OOG6_108161
Panther 1 1.100 - - O PTHR14963
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5254
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.790

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