DRSC/TRiP Functional Genomics Resources

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Protein Alignment conu and Chn2

DIOPT Version :9

Sequence 1:NP_001036454.1 Gene:conu / 3355133 FlyBaseID:FBgn0039994 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001157112.1 Gene:Chn2 / 69993 MGIID:1917243 Length:468 Species:Mus musculus


Alignment Length:487 Identity:89/487 - (18%)
Similarity:174/487 - (35%) Gaps:160/487 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 EQSNEI-------YLKQNLRRTPSAPPKSGTYADIFRGSQVRCDIPLYSADGVELLGYSRIGTI- 223
            ||::|:       |:.:..:|.|      |.|....|......:..|:. ||...:|..|..:| 
Mouse    67 EQADELLGGVEGAYILRESQRQP------GCYTLALRFGNQTLNYRLFH-DGKHFVGEKRFESIH 124

  Fly   224 -----------------QFPRNRSVSDPFCSIG-----RSKE----SRSENDARSQKKKSSE--- 259
                             ::....:.:..:..||     |.|.    |||:|::|.....:.|   
Mouse   125 DLVTDGLITLYIETKAAEYIAKMTTNPIYEHIGYATLLREKVSRRLSRSKNESRKASVSNEEHTP 189

  Fly   260 -----------VLSASENE-------------------CGRLLPMPYNVLSFESICRDSSSLDSC 294
                       .|:.::|.                   |.......:.:::....|.|.    ..
Mouse   190 VEKISSLVRRAALTHNDNHFNYEKTHNFKVHTFRGPHWCEYCANFMWGLIAQGVRCSDC----GL 250

  Fly   295 EVLDTCD--IPSTLFTDVVLISETDMKRLQTILWLELATIFDRNKVSLDKRKPFKRRRKEEGNLF 357
            .|...|.  :|:.        .:.|:||::.:...:|.|:.          |....:|       
Mouse   251 NVHKQCSKHVPND--------CQPDLKRIKKVYCCDLTTLV----------KAHNTQR------- 290

  Fly   358 GVSINALIRRDQQVTGTDSSLVPLFLEKLIGELLRRGSREEGLLRIGGHKQKTELLYNELESTFY 422
                                  |:.::..|.|:..||.:.|||.|:.|..:..|    :::..|.
Mouse   291 ----------------------PMVVDICIREIEARGLKSEGLYRVSGFTEHIE----DVKMAFD 329

  Fly   423 QNPDNLD---NLFRTATVHELSSLLKRWLRELPQPLLTNELIQLFYQCHTLPSIDQ-MNALSILC 483
            ::.:..|   |::  ..::.::..||.:.|:||.|::|.:....|.:...:.:.|: :.|:..:.
Mouse   330 RDGEKADISANIY--PDINIITGALKLYFRDLPIPIITYDTYSKFIEAAKISNADERLEAVHEVL 392

  Fly   484 HLLPPENRNTLRSLLSFF-NIIINLKDINKMNVHNVATIMAPSMFPPRYIHPSDNNSIAEQVRMA 547
            .||||.:..|||.|:... .:.:|.|| |.||..|:..:..|::..|    |.|:.         
Mouse   393 MLLPPAHYETLRYLMIHLKKVTMNEKD-NLMNAENLGIVFGPTLMRP----PEDST--------- 443

  Fly   548 AQCCRLTNILILRGEKLFQVPNNLIVESQKTM 579
                 ||.:..:|.:||..   .:::|::..:
Mouse   444 -----LTTLHDMRYQKLIV---QILIENEDVL 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
conuNP_001036454.1 RhoGAP_ARHGAP18 356..576 CDD:239856 49/224 (22%)
Chn2NP_001157112.1 SH2_a2chimerin_b2chimerin 52..138 CDD:198215 15/77 (19%)
C1_1 215..267 CDD:278556 6/63 (10%)
RhoGAP_chimaerin 275..468 CDD:239837 53/260 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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